Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00851 ATGGGCGGCCGCTCGGTGTTCACCTTGGCTGAGGTTGCTTCCCATGACAATCGCAACGATTGCTGGTTGATCATTGAAGACAAGGTGTATGATGTAACAAAATTCCTTGAAGAACATCCTGGTGGTGATGAAGTCTTGTTGTCAGGTGTTGGTAAGGATGCAACCAATGATTTTTTCGATGTTGGGCACAGTAGCACTGCCAGAGCAATGATGGAAGAATTTTATGTAGGTGATATCGATAGCTCAACTATTCCTGCAAAAAGAGAGTATACTCCTCCAAAGCAACCCCTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCTTGGTAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATATCAAAACAACTTAA 402 43.53 MGGRSVFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEEHPGGDEVLLSGVGKDATNDFFDVGHSSTARAMMEEFYVGDIDSSTIPAKREYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILGLAFGIHLYIKTT* 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11107494 11109420 + Chy4G075690.1 Chy04g00851 224750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00851 133 PANTHER - 1 131 - -
Chy04g00851 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Chy04g00851 133 Gene3D - 3 85 IPR036400 -
Chy04g00851 133 PANTHER CYTOCHROME B5 1 131 - -
Chy04g00851 133 SMART Cyt_b5_2 7 80 IPR001199 -
Chy04g00851 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Chy04g00851 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Chy04g00851 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Chy04g00851 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Chy04g00851 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Chy04g00851 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Chy04g00851 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 89 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00851 Chy-Chr4:11107494 Chy05g00551 Chy-Chr5:5995328 2.14E-64 dispersed
Chy05g01399 Chy-Chr5:18045184 Chy04g00851 Chy-Chr4:11107494 7.03E-21 transposed
Chy04g00851 Chy-Chr4:11107494 Chy06g00372 Chy-Chr6:2493956 4.57E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00851 K23490 - csv:101212882 269.24