Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00919 ATGTCTTCGATTTGCTTTTCTCTTGCTCAGTGGAGAACTTCTAAGAGTTGTCTATTGTCACTGGTTTCAGGACAATCGTCAGTTTCACCACATATATACTTATCTCCTTCCTTACAGCCAAGCCTGCAAACAATGATTCCAGGGATGTCAACAGAGCATGGTACAAAGTCGATCTTACTAACTCTGCCAACAAACCTAAATTCTTCTCAGCTTCAGCTTCCTGTGTCTGAAGTTGGTTTTCAACAACTTGAAGAGGAACATTTACGTGATAACTGGATATCTAAGTCTTTATTGGGACCATCTACTTCTCCTGCACCCTCTCCAGGTCCCAGCAGTGCACCCTTGCCTGTCCGACGTCATCGACGGCGTCGTGGACGACCTCATGTGGCTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAATGAGCTTGAAAGTGAGATTGCAGTTGGGACTTACTTAGAGCAGAGCCAAGTGAAAATCATGGGTGCAAGTGCAGACAGTCAAAACCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGGGAGAAGTTTGATAATACAACTGCAGTACTTACTTACAGGAGGTTTTGGGATAAAAAAGTACATTTGAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATTAGCTATCCGGGGATTCCTTCTTCACCGCCATATGGGGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCTATTACTGCAAATTTTGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATTATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTTTCTATCTTTTTCAAATGGAGAAAAGTTGGCAGACCGTCTAGTGCTGTTGGCCCAGTCTTCACACCATCAATTAACAAAAGATCTGGTTTAGGATCAGCCTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCACTAATGTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTGGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGGACGATGGAAATGAAGTTGCAGTTAAGTTGCTTACACGGGATAACCAGAATAGAGACCGTGAATTTATTGCAGAAGTTGAGATGTTGAGTAGACTGCATCATCGAAATCTTGTGAAACTGATTGGCATATGCATTGAAGGGCGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCATGGCATTGACAAGAGAAGCGGATCTCTTGATTGGGACGCACGATTAAAGATTGCTCTTGGGGCAGCAAGAGGTTTGGCATATCTTCACGAAGATTCTAATCCTCGTGTAATTCACCGTGATTTTAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTCGGATTGGCAAGGGAAGCAACTGAAGGAAGTGAACACATCTCAACACGGGTGATGGGAACTTTCGGGTACGTAGCCCCTGAATATGCCATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTATAGTTATGGAGTCGTGCTACTTGAACTTCTTTCAGGACGAAAACCAGTAGACATGTCCCAACCACATGGTGAGGAGAATCTCGTAACGTGGGCACGGCCTCTATTGACTAGTAGAGAAGGTTTGGAGCAACTAGTAGATCCTTCTTTAGCTGGTACTTACGACTTCGATGACATGGCCAAAGTAGCTGCCATTGCTTCGATGTGTGTTCATCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAAGCTCTAAAACTGATATACAATGACACAGACGAGACATGTGCAGATTACTGCAGTCAAAAGGAGTCCTCGGCTCGGGACTCGGATTTCAAAGGCGACCTTGTCCCATCCGACAGCAGTTGGTGGAATGCTGGTGGCCTTACACCTCGACTCACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATATAGCTCTGGGCCTCTTGAAGAAATGGAAAACCGTCCGTTTTCAACTTCAAGTTTGGTAGGCGATGAGATATCTTTGCCTATTCGACATGGAAACAGGTCAGGTCCGTTGCGAACTGCTCGAAGTAAGCCTTCATTCTATAGATTTTCGGGAAGTAGGAGCGAGCATGGAGGATTTCTTTCAAGACCTTCTTGGAACAGCAACGGGTTTTGGGTTTGA 2391 44.37 MSSICFSLAQWRTSKSCLLSLVSGQSSVSPHIYLSPSLQPSLQTMIPGMSTEHGTKSILLTLPTNLNSSQLQLPVSEVGFQQLEEEHLRDNWISKSLLGPSTSPAPSPGPSSAPLPVRRHRRRRGRPHVAAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGASADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTPSINKRSGLGSALSSSIASSTSVSLMSTMPTSLQSVKTFALSELEKATDKFGSKRILGEGGFGRVYCGILDDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRSGSLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPSFYRFSGSRSEHGGFLSRPSWNSNGFWV* 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13055727 13061302 - Chy4G076370.1 Chy04g00919 224818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00919 796 Gene3D Phosphorylase Kinase; domain 1 363 467 - -
Chy04g00919 796 SUPERFAMILY Protein kinase-like (PK-like) 369 667 IPR011009 -
Chy04g00919 796 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Chy04g00919 796 Pfam Protein tyrosine and serine/threonine kinase 395 663 IPR001245 GO:0004672|GO:0006468
Chy04g00919 796 CDD STKc_IRAK 398 667 - -
Chy04g00919 796 ProSiteProfiles Protein kinase domain profile. 392 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00919 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Chy04g00919 796 PANTHER OS01G0750732 PROTEIN 86 792 - -
Chy04g00919 796 Gene3D Transferase(Phosphotransferase) domain 1 468 690 - -
Chy04g00919 796 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 86 792 - -
Chy04g00919 796 MobiDBLite consensus disorder prediction 95 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02205 Chy-Chr1:26545614 Chy04g00919 Chy-Chr4:13055727 9.62E-15 dispersed
Chy02g01226 Chy-Chr2:8870818 Chy04g00919 Chy-Chr4:13055727 0 dispersed
Chy04g00919 Chy-Chr4:13055727 Chy11g01816 Chy-Chr11:24519828 8.63E-102 dispersed
Chy07g01635 Chy-Chr7:20364310 Chy04g00919 Chy-Chr4:13055727 1.46E-129 transposed
Chy08g00997 Chy-Chr8:17220308 Chy04g00919 Chy-Chr4:13055727 7.87E-101 transposed
Chy04g00919 Chy-Chr4:13055727 Chy05g01369 Chy-Chr5:17799292 6.70E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71193 PF07714 PK_Tyr_Ser-Thr 4.20E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00919 - - csv:101203278 1361.28