Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00924 ATGGAGGAAGTGGATGACGGAAGCGTGGGTGGAGCGAGGAGAGATAATCATGATACGATGACAGCGGAAGTTAGTAGTGAGAATTCGGGACCGGTGGTGAGGTCTAGATCGGAGGAGGAAGAGGAGGAGGAGGAGGAGGGAGGAGGGCAGGATGATCAGGAGAATGAATTAGTAGATCATGGGTGTCAGTTAAAGAGAAGGAAGAAATATCATCGCCATACCACCGAGCAGATCAGAGAAATGGAGGCGTTGTTTAAAGAGTCGCCACATCCAGATGAGAAACAAAGGCAGCAACTCAGCAAGAGATTAGGACTTTCACCAAGGCAGGTCAAGTTTTGGTTTCAGAATCGTCGAACCCAAATCAAAGCTATTCAAGAGAGGCATGAAAACACATTGTTAAAAGCTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAAATTTCCAAGAAAAAAATTGGTTGTCCCAATTGTGGAACTACCGACGCTACTCAAGACGACCTCGTTTTCACAACCACCGAGCAATTACGTATTAAGAATGCCAAGCTTAAAGCCGAGGTCGAGAAACTACGAGCAGCACTGGGAAAATATCCACAAGCGGCAGCGTCTCCATCGACATACTCGTCTGGGAACGAACAAGAGACGTCGAACAGAATCTGCTTAGATTTTTACACTGGAATATTTGGGCTTGAAAAGTCAAGAATCATGGAGAAAGTTGATGAAGCAGTTGAAGAGCTGAAAACAATGGCTGCAGCCGGCGACCCACTTTGGGTCCGGAGCGTGGAGACGGGAAGAGAGATTTTAAACTACGATGAGTATTTGAAAACCTTTCAATTCAGCAATAATAATTCAAACACTCGTAATTGCCTCAGAACACACATTGAGGCCTCGAGAAAGACGGCTCTTGTTTTCATGGAGCCATCAAGGTTGGTTCAAAGCTTCATGGATGAGAATCAATGGAAGGAAATGTTTCCTTTTATGATATCAAAGGCAGCTACAGTTGATGTTATTTGTAATGGAGAAGCTGCCAATTGGAATAATGGAGCAGTGCAATTGATGTTTGCAGAAGTGCAAATGCTTACACCATTAGTCCCCACAAGAGAAATGTATTTCATTCGCCATTGCAAGCAGCTCGACGCAGAACAGTGGGCAATCGTTGATGTTTCAATCGAAAACGTTGAAGATAACAATATCGATGTATCATTAGTGAAATATAGAAAACGTCCATCTGGTTGCATCATTAAGGACGAATCTAATGGTCATTGCAAGGTAACAATGGTGGAACATTTGGAATGTGTAAAAAGCAAAGTTCACAACTTGTATAGAAGCATAGTGAACAATGGCACAGCCTTTGGGGCAAGACATTGGATGGCAACTCTTCAACTCCAATGTGAACGTTCTGCTTTCTTCATGGCAACAAACATCCCCATGAAAGACTCAACTGGAGTGTCAACACTAGCCGGAAGAAAAAGCACATTAAAGTTGGCACAGAGAATGAGTTGCAGCTTCTCCCAAGCAGTTGCAGCTTCCAGTTATCAAACATGGACCAAAGTTGTGGGAAAATCAGGAGAAGACATTAGGGTTTGTTCTAGGAAGAATCTTAGTGACCCTGGCGAACCCAATGGAGTTATTTTGTGTGCCGTTTCTTCTCTCTGGTTACCTCTTTCCCCTAATCTTCTCTTCGATTTCTTTCGAAATGAATCTCGTCGAAGTCAATGGGACGCTATGTTTGGTGGAGATAAAGCTAAGACCATTGCAAATTTGGCTAAAGGACAGGATCGAGGCAACTCAGTTACTATTCAAACTATAGGATCAAAAGAGAACAACAACAACAACATGTGGATCCTACAAGACAGCTCCACAAACTCATCGGAATCCATGGTGGTTTACTCCGGAGTAGACGTTACCAGCATGCAGTCAGTTATGTCAGGTTGTGATTCCGGCAGCGTCACCATTCTCCCTTCAGGTTTTTCAATTCTCCCTGACGGGGCCGATTCCCGACCACCCCTCCTCATCACTCGTCGTAAGGACGACAAAACTTCCGACACACACGGTGGGGCTCTACTGACCGCCGCCGTCCAAATCCTAACCGACACATCTCCCGCTGCAAAACCCACTTTGGAATCGGTTGAGTACGTTAAAAGCATCATTTGTTGTACGTTAAAAAATATTAGAACCAGCATGTGTTGTGAGGAGGATTAA 2208 44.16 MEEVDDGSVGGARRDNHDTMTAEVSSENSGPVVRSRSEEEEEEEEEGGGQDDQENELVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTTDATQDDLVFTTTEQLRIKNAKLKAEVEKLRAALGKYPQAAASPSTYSSGNEQETSNRICLDFYTGIFGLEKSRIMEKVDEAVEELKTMAAAGDPLWVRSVETGREILNYDEYLKTFQFSNNNSNTRNCLRTHIEASRKTALVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEAANWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVSLVKYRKRPSGCIIKDESNGHCKVTMVEHLECVKSKVHNLYRSIVNNGTAFGARHWMATLQLQCERSAFFMATNIPMKDSTGVSTLAGRKSTLKLAQRMSCSFSQAVAASSYQTWTKVVGKSGEDIRVCSRKNLSDPGEPNGVILCAVSSLWLPLSPNLLFDFFRNESRRSQWDAMFGGDKAKTIANLAKGQDRGNSVTIQTIGSKENNNNNMWILQDSSTNSSESMVVYSGVDVTSMQSVMSGCDSGSVTILPSGFSILPDGADSRPPLLITRRKDDKTSDTHGGALLTAAVQILTDTSPAAKPTLESVEYVKSIICCTLKNIRTSMCCEED* 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13249200 13259022 - Chy4G076420.1 Chy04g00924 224823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00924 735 MobiDBLite consensus disorder prediction 1 57 - -
Chy04g00924 735 ProSiteProfiles START domain profile. 230 471 IPR002913 GO:0008289
Chy04g00924 735 SMART HOX_1 66 128 IPR001356 GO:0003677
Chy04g00924 735 SUPERFAMILY Bet v1-like 232 468 - -
Chy04g00924 735 CDD homeodomain 67 122 IPR001356 GO:0003677
Chy04g00924 735 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 730 IPR042160 -
Chy04g00924 735 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Chy04g00924 735 Gene3D - 240 469 IPR023393 -
Chy04g00924 735 Coils Coil 123 153 - -
Chy04g00924 735 Coils Coil 175 195 - -
Chy04g00924 735 CDD START_ArGLABRA2_like 234 467 - -
Chy04g00924 735 SUPERFAMILY Homeodomain-like 57 125 IPR009057 -
Chy04g00924 735 SUPERFAMILY Bet v1-like 491 667 - -
Chy04g00924 735 ProSitePatterns 'Homeobox' domain signature. 99 122 IPR017970 GO:0000981|GO:0006355
Chy04g00924 735 SMART START_1 238 468 IPR002913 GO:0008289
Chy04g00924 735 Gene3D - 54 138 - -
Chy04g00924 735 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 16 730 - -
Chy04g00924 735 Pfam START domain 242 468 IPR002913 GO:0008289
Chy04g00924 735 MobiDBLite consensus disorder prediction 1 21 - -
Chy04g00924 735 MobiDBLite consensus disorder prediction 38 52 - -
Chy04g00924 735 Pfam Homeodomain 67 122 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02083 Chy-Chr1:25557411 Chy04g00924 Chy-Chr4:13249200 0 dispersed
Chy04g00924 Chy-Chr4:13249200 Chy11g00599 Chy-Chr11:6948159 0 dispersed
Chy04g00924 Chy-Chr4:13249200 Chy11g02014 Chy-Chr11:25991815 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17842 PF01852 START 1.20E-53 CL0209 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00924 K09338 - csv:101221341 1431.77