Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00985 ATGCCATGTTTGATTCACGCACCCTTTTTGCTAATTTTTGTGCTTCTCTCCAATCTCCAGCTCTGTTTTTCACAAGATTACATTATTGGTGGTGGTGCTGGTGATGGTGATGGCGACTCTCCGCCTGAGGCAGGGGCACCACCGGAGCAAAATGAATGTAATGGGATATTCTTAACGTACACATTTTTTTCAAGGGAAAAAGAATTTCCTCATGTGAAGAATGCTTCTGCTCAGGCTTGGGCGTTCAGAGCTCAGGCGACGTTGTTGAACGCCGGCACCACGGAGCTGGAGGGTTGGAAGATGTACATTGGGTTTCAACATAGAGAGATTTTAGTGTCGGCGAGTGGGGCTGTGTTGGTGGACGGTTCGGATTTTCCGGCGGATGTGGGGAAAGGAGTGATCTTGGCTGGGTACACACAAACGGACTTGAAAACGGCGATAGAAACTGCCGGAGATTATAACCAAATGCAGATAACGATTGATATCACCGGAACACAATTCGGTGTGAAGAAGAATGGAATTCCGATGCCGAAAACGATTCGCCTTGAAAACGAAGGCTTTAAGTGTCCGCAGCCACGCCGTCATCGCAACAAAAGCTATATGCACATTTGCTGCAAGAAAGACCCCAAATTCAAGGAAAAACCACTAAAGAAGACTAAGTTTTTGCCGAGACAAAACGGCGATCTCTCCCTCACCTATGATGTTCTCCAAGCTTACGGCAACAACTATCTCGCACAAGTCACCATCGACAACAACAACCCTCTCGGCCGCCTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACCATGAGAGGAGCTTATACTCACAAAACTGATTCCTCAGACTGCATCTTTGGCCCTCAAGGCCAATACTATCAAGATTTTGACTTCTCCCAAGTCATGAATTGTGAGAAAAATCCCATCATTGCCGACCTTCCTTCCGATCGAGCCAACGATTCCAAGGTTGGGAAGTTACCCTTCTGCTGCAAGAACGGCACGATCTTACCGTCATTGATGGATCAAAGCAAAGCAAGGTCTATTTTTCAGCTCCAAGTCTATAAACTTCCTCCTGACTTCAATAGAACTGCCTTGTACCCTCCTCAGAAATGGAAGATCAATGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCCATTAGAGTTGAACCAACAGAATTTCCTGACTCAACTGGACTTCAAGCCATAACCACAGCCATTGCTAGTTGGCAAGTGGTTTGCAACATTACAACTCCAAAACCTAAACAATCTAGATGTTGTGTTTCTTTCTCTGCTTATTATAATGACTCTGTTATCCCTTGCAATACTTGTGCTTGTGGATGTGATGAGCCTCAAACTTGCAACCCAAATTCTTCCCCATTGCTTCTTCCACCAGAAGCCCTTTTAGTTCCATTTGACAATAGAACTATAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTACCAATCCCAAAGAAGCTCCCTTGTCCTGATAATTGTGGAGTTAGTTTAAATTGGCATATAAACTCAGATTATAGCAGTGGTTGGACTGCTAGAATCACTCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGGATAAAGCTGCTAAAGGCTATGAGAATGTGTACTCTTTCAATGGGACTAAACTCCCGCTAGATATGATCAAGAACACCATCTTGTTTCAAGGATTGGAAGGTTTGAATTACCTGATGGGGGAGACGAATGGGACAGACCCGAAATTCGATCTGCGGGTACCGGGAAAGCAACAATCGGTGATCTCGTTCACTAAGAAGAATATGTGGAACCTCAATATAAAGGAAGGAGATGGATTCCCTTCAAAGGTTTATTTCAATGGAGAAGAGTGTGAGATTCCTCCTCATATTCCTTTAGGAAATGGTGCTGCACATAGCCTTCATGTCAGCTCTGGACCTTTAATGCTGCTACTTACAGCTGTGGCCTTCTTCATGGCCATTGACTAA 2016 44.3 MPCLIHAPFLLIFVLLSNLQLCFSQDYIIGGGAGDGDGDSPPEAGAPPEQNECNGIFLTYTFFSREKEFPHVKNASAQAWAFRAQATLLNAGTTELEGWKMYIGFQHREILVSASGAVLVDGSDFPADVGKGVILAGYTQTDLKTAIETAGDYNQMQITIDITGTQFGVKKNGIPMPKTIRLENEGFKCPQPRRHRNKSYMHICCKKDPKFKEKPLKKTKFLPRQNGDLSLTYDVLQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHKTDSSDCIFGPQGQYYQDFDFSQVMNCEKNPIIADLPSDRANDSKVGKLPFCCKNGTILPSLMDQSKARSIFQLQVYKLPPDFNRTALYPPQKWKINGILNPNYKCGAPIRVEPTEFPDSTGLQAITTAIASWQVVCNITTPKPKQSRCCVSFSAYYNDSVIPCNTCACGCDEPQTCNPNSSPLLLPPEALLVPFDNRTIKAKAWAKIKHLPIPKKLPCPDNCGVSLNWHINSDYSSGWTARITLFNWEEYPFEDWFAAVQLDKAAKGYENVYSFNGTKLPLDMIKNTILFQGLEGLNYLMGETNGTDPKFDLRVPGKQQSVISFTKKNMWNLNIKEGDGFPSKVYFNGEECEIPPHIPLGNGAAHSLHVSSGPLMLLLTAVAFFMAID* 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14478408 14482069 + Chy4G077030.1 Chy04g00985 224884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00985 671 PANTHER COBRA-LIKE PROTEIN 10 10 668 - -
Chy04g00985 671 PANTHER COBRA-LIKE PROTEIN 7 10 668 - -
Chy04g00985 671 Pfam COBRA-like protein 243 422 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00985 Chy-Chr4:14478408 Chy06g01797 Chy-Chr6:21574943 0 dispersed
Chy04g00985 Chy-Chr4:14478408 Chy02g02401 Chy-Chr2:27765988 3.95E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00985 - - csv:101216608 984.556