Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01022 ATGCCAACAGTTTGGTTTTCTTTGAAAAAGTCTTTCCCTTGCAAACCAGAGCCATCTGAAGTCTATGATCCAAAGAACAGGAAACAACTCAACACAATCACAACTAAGAAAGCATCCAGAAAGTCAGGTTGTTCTTCTGGAAGGTCTGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAGAGGCACATGGAAAAACCACCGATATGCAGCCCGAGATCGATCGGTAGCAGCGAGTTCCTCAACCCAATTGCTCATGAAGTCATACTAAGCAACTCCAAGTGTGAGCTCAAGATCACTGGTTTTGGAAGCTTCCACCAAGAGGATGTGGGAAGTGCTGGCTTTGGCGGGGGTGGGGGTGGGAATTCGCCATTTTTCGGTACACTAAGACCCGGAACTCCTGGTCCTGGAGAGCACTTTGTTAACAACTCCAATTCTCCTTTTAATAATACTTCCATGTCTGGTGCAAGAAAGGTTCCTTCTCTTTTATCAAATAGAGATGGGTCTGCAGCTGGGAGTACTGCTAAATCTAAGGTGAGTGGGGAAGTTCATCCAAGCAAAAGATTCTCCCCGCTAACTGAATTAAACGGTAATACGTTTTCCACGGTTACTTGCCATAAATGTGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCTAAGCATGCTGTTACCGAGCTTGTGGAAGGCGATTCATCAAGAAAAATTGTCGAAATAATATGTCGAACGAACTTGTTGAAATCGGAGAACAATGGCAACCGAATCGAACGAGTCTTCAAAGTTCATAATATGCAAAAGACATTAGCTGGATTTGAAGAATACAGGGAAATGGTGAAGATCAAGGCAAGCAAGCTTTCGAAGAAACACCCTCGCTGCCTTGCTGATGGTAACGAGCTGCTGAGGTTTTATGGAACTACTTTAGCCTGCTCTCTTGGACTAAATGGCTCCTCTAGCCTCTGCATATCACAGAAGTGCAGTGTCTGCAGAATCATAAGGAATGGTTTCTCAACCAAGAAGGATATAAAAGAAGAAGTAGGAGTTTTCACGACTTCGACAAGCGGAAAAGCTTTCGAAACCATCAAAACGACAGAAGAAAGCTCGGTAAAGAAAGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTACATAGGCCTCTGGAAAATATACAAGATATGGTTGGCCAAGCAGGGTTTGATTCTTTAGCTGGCAAAGTGGGATTACATTCCAATATTGAAGAGCTTTATTTGCTTAATCCTAGAGCTTTGCTTCCTTGTTTTGTTGTAATCTGCAAACTATGA 1326 43.36 MPTVWFSLKKSFPCKPEPSEVYDPKNRKQLNTITTKKASRKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFHQEDVGSAGFGGGGGGNSPFFGTLRPGTPGPGEHFVNNSNSPFNNTSMSGARKVPSLLSNRDGSAAGSTAKSKVSGEVHPSKRFSPLTELNGNTFSTVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLLKSENNGNRIERVFKVHNMQKTLAGFEEYREMVKIKASKLSKKHPRCLADGNELLRFYGTTLACSLGLNGSSSLCISQKCSVCRIIRNGFSTKKDIKEEVGVFTTSTSGKAFETIKTTEESSVKKALIICRVIAGRVHRPLENIQDMVGQAGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKL* 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15163880 15165504 + Chy4G077400.1 Chy04g01022 224921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01022 441 MobiDBLite consensus disorder prediction 119 197 - -
Chy04g01022 441 ProSitePatterns Zinc finger C2H2 type domain signature. 210 231 IPR013087 -
Chy04g01022 441 PANTHER - 2 440 - -
Chy04g01022 441 MobiDBLite consensus disorder prediction 171 185 - -
Chy04g01022 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 440 - -
Chy04g01022 441 Gene3D - 238 440 - -
Chy04g01022 441 MobiDBLite consensus disorder prediction 143 164 - -
Chy04g01022 441 SUPERFAMILY ADP-ribosylation 233 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00363 Chy-Chr2:2330584 Chy04g01022 Chy-Chr4:15163880 6.84E-06 dispersed
Chy04g01022 Chy-Chr4:15163880 Chy06g01739 Chy-Chr6:20242805 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01022 - - csv:101213316 828.935