Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01026 ATGGACTCTCACCAACTCTTTGGATTTGGGGTTAATAGTGCTGCTGGTCTTTCATTTACACCTTCCTGTTCCTCTGTTCCTTCTTTACCTAATACTTTGCTTGGACCCTTGAAATTCAATTTAAGTAGTTCACCGGCTTTGTCTCCGCTATTCTCTTCGCATTTTGAATTCGATTCCTTTACGACGACGACGACTGTGAGTGATAGTCCGGATCAAAGAAACTCCCCAGATAATCTCTCTGGACTCAGCCCTTCTTGCAATTCGTCCTTTGAAACCAGTAGCTTTAATCAAATAGCTTCATCGTATTTGGATCCTTTTGAGGACGAGAGTCGGCAATTGTATTCGAGGTCGAATGCGTTTGTTTATGACGGATGCTCCACTGAGAACATAAGCTACACTTTGAAACAATTGGAGAGTGTTCTGATGGGGCCGGATAATGAGGAAGTTGTGAGCAAGCCTGATGTTTCGTTTGGAGTGAGTGGCAGGCCACAGATGATGGGGCCGAGGTCTTACTCATGGAGCCAAGATCGACATGGTGGGTCCTATGGTGTTCAGTCTCAGGCGTTGCCAGTGTCGAGAAGCCAGAAATCCGAGGCAGTTCACTTGGGGAAACGACAGAAATCGATGGATGAATCATTGTTGCAGCAGCAGGGAGGATTGCCATCGGATAATTTGAAAGACTTGTTGATTGCTTGTGCAAAAGCTTTATCTGACAACAGGATGAAGGATTTTGATAACTTGGTCGCTACAGCAAGAGGCGCCGTGTCTATTGGTGGAGAGCCAATCCAGCGTCTTGGCGCTTACATGGTGGAAGGGTTGGTGGCCAGGAAAGAGGAATCGGGGGCAAATATATATCGAGCTCTCAACTGTAGGGAGCCTGCAAGTGATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCCTACTTGAAGTTTGGTTACATGGCAGCGAACGGGGCGATTGCTGAAGCCTGTAGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGAACGCAGTGGTTAACTCTTCTACAGGCACTTGCAGCAAGGCCTAGTGGGGCTCCCCATGTGAGAATAACTGGTATTGATGACCCTGTTTCTAAATATGCTCGTGGCGATGGGTTGGAGGTTGTGGAGAGGCGGTTGGCCGAAATCTCCATGAAGTATGGAATACCAGTGGAGTTTCATGGAATGCCTGTTTTTGCTCCACACATCACGCGTGATATGCTCGACATCAGACCCGGGGAGGCTTTGGCTGTAAATTTCCCATTGCAACTTCATCATACCCCAGACGAAAGCGTGGATGTGAACAATCCACGCGACGGTCTGCTGAGAATGGTGAAGTCGTTATCTCCAAAGGTAGTAACTTTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTTTGGAAACTTTAGATTACTACTTAGCAATCTTTGAGTCCATTGATGTCACTCTACCAAGGAACAACAAGAAGCGCATCAATGTTGAGCAACATTGTTTGGCCAAAGATATTGTTAACGTCATCGCTTGTGAGGGGAGGGATCGAGAAGAGCGCCATGAGCTCTTTGGCAAGTGGAAATCGAGGTTGACAATGGCAGGGTTCCGCCAGTCCCCATTGAGCTCTTACGTCAACTCTGTCATTAGGAGTCTGCTCAAGTATTATTCGGACCATTACACGCTCGACGAAAAGGATGGAGCTATGCTGCTGGGGTGGAAAAACAGGAACCTGATATCTGCCTCGGCTTGGTATTAA 1788 46.81 MDSHQLFGFGVNSAAGLSFTPSCSSVPSLPNTLLGPLKFNLSSSPALSPLFSSHFEFDSFTTTTTVSDSPDQRNSPDNLSGLSPSCNSSFETSSFNQIASSYLDPFEDESRQLYSRSNAFVYDGCSTENISYTLKQLESVLMGPDNEEVVSKPDVSFGVSGRPQMMGPRSYSWSQDRHGGSYGVQSQALPVSRSQKSEAVHLGKRQKSMDESLLQQQGGLPSDNLKDLLIACAKALSDNRMKDFDNLVATARGAVSIGGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVERRLAEISMKYGIPVEFHGMPVFAPHITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFLETLDYYLAIFESIDVTLPRNNKKRINVEQHCLAKDIVNVIACEGRDREERHELFGKWKSRLTMAGFRQSPLSSYVNSVIRSLLKYYSDHYTLDEKDGAMLLGWKNRNLISASAWY* 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15263883 15265670 + Chy4G077440.1 Chy04g01026 224925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01026 595 Pfam GRAS domain family 225 594 IPR005202 -
Chy04g01026 595 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 20 594 - -
Chy04g01026 595 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 594 IPR005202 -
Chy04g01026 595 MobiDBLite consensus disorder prediction 154 178 - -
Chy04g01026 595 ProSiteProfiles GRAS family profile. 216 595 IPR005202 -
Chy04g01026 595 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01026 Chy-Chr4:15263883 Chy06g01877 Chy-Chr6:22636667 1.16E-174 dispersed
Chy04g01026 Chy-Chr4:15263883 Chy12g00215 Chy-Chr12:2538666 1.20E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17850 PF03514 GRAS 8.60E-127 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01026 - - csv:101216606 1136.71