Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01095 ATGGGGAATGACCAATTACAAGTTTTAAATGCACTTGATGTAGCTAAAACACAATGGTATCACTTTACAGCAATCATCATCGCTGGAATGGGATTCTTCACTGATGCCTATGATCTATTTTGTATTTCTCTTGTAACCAAATTGCTTGGAAGAATATATTATCATGTTGATGGTGCATTAAAGCCAGGGACATTGCCTCCAAATGTTGCTGCTGCTGTTAATGGTGTGGCATTTGTTGGAACATTAGCAGGACAACTCTTCTTTGGTTGGTTGGGTGACAAAATGGGAAGAAAAAGAGTTTATGGCATGACTCTAATGCTTATGGTTATATGTTCTATAGGCTCAGGACTTTCTTTTGGCCACAATTCTCATTCTGTCATGACTACGCTTTGCTTTTTTCGATTCTGGCTCGGTTTCGGTATTGGTGGTGATTACCCTCTTTCAGCAACGATCATGTCGGAGTATTCTAATAAGAAGACTCGTGGTGCATTCATTGCTGCAGTTTTTGCCATGCAGGGGTTTGGTATTTTGGGTGGAGGTATATTTGCTATTTTCATATCTTTGGGATTTAAGGCTAAATTTGATGCTCCACCTTATGAAGTCGATCCAATTAAATCAACTGTACCACAAGCTGATTATATTTGGAGGATAGTTGTAATGGTTGGAGCTCTTCCTGCTGCTCTTACTTACTATTGGAGGATGAAAATGCCTGAAACGGCACGATACACAGCTCTTGTCGCGAAAGATACAACTCAAGCTGCATCTGATATGTCAAAAGTTTTGCAAATGGAGATCGAGGCAGAAGGACAAAAGCCTACTGCTCAAACGCCAAAGAAAAATGCGAGTCCAAGTACATATGGCTTGCTCTCTAAAGAGTTTTTGCATCGCCACGGAACTCATTTACTTGGAACTACAAGTACTTGGTTTTTACTTGATATTGCATTCTACAGTCAAAACTTGTTTCAAAAAGATATCTTTAGTGCAATTGGATGGATTCCTCCAGCAGCAACTATGAATGCAATTGAAGAAGTTTTTAGAATAGCCAGAGCTCAAACACTCATTGCTCTTTGTAGTACTGTCCCTGGCTACTGGTTCACAGTGGCTTTCATTGACAAAATAGGAAGGTTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCCATTCCCTACCATCATTGGACTCTAAAGGACAACCGAATTGGCTTCGTGGTCCTCTACTCACTAACGTTCTTCTTTGCAAATTTTGGACCAAATGCAACAACATTTGTCGTCCCAGCTGAAATCTTTCCAGCACGATTTCGTTCTACTTGTCACGGTATATCATCGGCATCTGGGAAGCTTGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAACCCGGACAAGAACAAAACAGATGCAGGATATCCTCCTGGCATTGGCGTCAAGAACTCCCTTCTATTGTTGGGTGGACTTAACTTTTTGGGAATTTTGTTTACTTTTCTTGTGCCTGAAGCTAAGGGAAAATCATTGGAAGAAATGTCTGGTGAGAATGAAGATGGTACCATCGGAGAATTGGGGGCCCAAACATCTTCTAGTGCTACAGTTTCACAGGTTTAA 1629 40.76 MGNDQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGALKPGTLPPNVAAAVNGVAFVGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHNSHSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIFISLGFKAKFDAPPYEVDPIKSTVPQADYIWRIVVMVGALPAALTYYWRMKMPETARYTALVAKDTTQAASDMSKVLQMEIEAEGQKPTAQTPKKNASPSTYGLLSKEFLHRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIEEVFRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNPDKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTIGELGAQTSSSATVSQV* 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16870346 16871974 - Chy4G078130.1 Chy04g01095 224994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01095 542 CDD MFS_PhT 25 510 - -
Chy04g01095 542 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 524 - -
Chy04g01095 542 SUPERFAMILY MFS general substrate transporter 11 518 IPR036259 -
Chy04g01095 542 Pfam Sugar (and other) transporter 26 518 IPR005828 GO:0016021|GO:0022857|GO:0055085
Chy04g01095 542 Gene3D MFS general substrate transporter like domains 275 533 IPR036259 -
Chy04g01095 542 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Chy04g01095 542 TIGRFAM 2A0109: phosphate:H+ symporter 11 520 IPR004738 GO:0005315|GO:0006817|GO:0016021
Chy04g01095 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 511 IPR020846 GO:0022857
Chy04g01095 542 MobiDBLite consensus disorder prediction 515 542 - -
Chy04g01095 542 MobiDBLite consensus disorder prediction 527 542 - -
Chy04g01095 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 524 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00359 Chy-Chr3:4887331 Chy04g01095 Chy-Chr4:16870346 0 dispersed
Chy04g01095 Chy-Chr4:16870346 Chy06g00477 Chy-Chr6:3190573 0 dispersed
Chy04g01095 Chy-Chr4:16870346 Chy06g00476 Chy-Chr6:3178352 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01095 K08176 - zju:107405539 889.412