Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy04g01124 | ATGGATTTCAATGCCCGTATGGGTTTTCCTCTTTTTCTCTGTTTTCTTTCACTTCTTGTTCAACCAAACACTTCCACTCTTCAAACTTACATCATTCAACTCCACCCACATGGTTTAATCACCTCTGTTTTTTATTCTAAGCTTCAATGGCACCTTTCTTTTCTTGAACAATCTCTTTCTGCCGAAGAAGATTCTTCTTCTCGCTTGCTTTACTCTTATTCTAATGCTATGGAAGGTTTTGCAGCACAGTTATCTGAAACTGAGCTTGAGTATTTGAAGAGGTTGCCTGATGTTGTGGCTGTTAGAGAAGATAGAAAGTATCAAATTCAAACGACTTACTCTCATAAGTTCTTGGGGCTTAGTGTTGGCACACAAGGTGTTCGGCAGAAGTCCTCAATGGGCCAAGGGGCAATAGTTGGGGTTCTAGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCCAAAATGCCCCCAATTCCACAAAAATGGCGAGGGGCTTGCCAAGAAGGGCAAGATTTTAATTCCTCTAATTGTAACAGGAAACTCATTGGTGCTAAGTTCTTTATCAAAGGACATCATGTGGCTTCGTCGCTGCCTTCCGATGTTGCCCAGGAGTATGTCTCCCCAAGAGACTCTCATGGTCATGGGACTCACACGTCTTCTACAGCTGCAGGTGCTTCCATCGCTGATGCTAGCGTGTTCGGTAATGGAGCTGGTGTGGCGCAAGGGATGGCCCCAGGAGCCCACATTGCTGTGTACAAGGTTTGTTGGTTCAGTGGCTGTTATAGCTCTGATATTGTAGCAGCCATGGATTCTGCAATAAGAGATGGTGTTGACATTCTCTCCCTTTCACTTGGTGGCTTCCCGCTTCCGTTTTTTGACGATAGTATTGCCATTGGAAGTTTTCGGGCAGTGCAGCACGGCATCTCAGTTGTCTGTGCAGCAGGAAACAATGGTCCAATTCAAAGCTCTGTTGCCAATGTAGCTCCTTGGATCACCACCATTGGTGCAGGCACACTTGACCGAAGATTTCCAGCTATAATTCGACTAAGCAATGGAGAAGCCATATACGGCGAATCAATGTACCCTGGAAACAAGTTCAAGCAAGCTACCAAGGAGCTTGAAGTAGTTTATTTGACTGGAGGGCAAATGGGAGGTGAGCTTTGCTTAAAAGGGTCTCTTCCAAGAGAAAAAGTACAAGGCAAAATGGTGGTTTGCGACCGTGGTGTCAACGGCAGATCAGAAAAGGGGCAAATTGTGAAGGAATCTGGAGGTGCTGCTATGATCCTTGCAAATTCAGAGATAAACCTAGAGGAAGACTTGGTTGATGTTCATGTTTTGCCAGCCACTTTGATTGGATTTGCAGAAGCAAATCGCTTAAAAGCTTACATTAACACCACAAGCAATCCAAAAGCCAGAATCCAATTTGGAGGAACTGTGATTGGAAGATCAAGAGCTCCTTCAGTAGCTCAGTTTTCATCAAGGGGTCCAAGCCTCTCTAATCCTTCAACTCTCAAACCTGATGTAATTGCTCCTGGTGTTAACATTATAGCAGCTTGGCCTCAAAATCTTGGTCCAACTGGCCTTCCACAAGATTCTAGAAGATCAAACTTCACTGTCATGTCAGGAACTTCCATGGCTTGTCCCCATGTCAGTGGAATTACAGCTCTAATCCATTCAGCTCATCCAAAATGGACACCTGCAGCTATCAAATCAGCCATTATGACAACTGCTGATGTTACTGATCATTTTGGTAAACAAATTCTTGATGGCAATAAACCAGCTGATGTTTTTGCAATGGGAGCTGGTCATGTAAACCCAACAAAAGCAATTGATCCTGGTCTAGTTTATGATATCAAACCATATGAATATATCATTCATCTTTGTGCTCTTGGATATACTCATTCAGAAATCTTCATTATCACCCACATGAATGTTAGTTGCCACAAAATTTTGCAGATGAACAAAGGCTTCACCTTGAATTATCCCTCCATATCTGTCATTTTTAAGCACGGAACGACGAGTAAGATGGTTTCAAGACGGTTGACGAATGTCGGGAGCACAAATTCAATCTATGAAGTGAAAGTAACTGCACCTGAAGGAGTAAGAGTTCGAGTTAAGCCACAGCGCTTGGTGTTCAAACACGTGAATCAAAGCTTGAATTATAAGGTATGGTTTATGTCTGAAAAGGGAAAGGAAGGGAGAAAAGTGAGGTTTACAGAAGGGGATTTGACATGGATTCATTGTGAGAATAGCAAATACAAAGTTAGAAGCCCAATTGTAGTGACTTGGAAGAACTAA | 2307 | 43.04 | MDFNARMGFPLFLCFLSLLVQPNTSTLQTYIIQLHPHGLITSVFYSKLQWHLSFLEQSLSAEEDSSSRLLYSYSNAMEGFAAQLSETELEYLKRLPDVVAVREDRKYQIQTTYSHKFLGLSVGTQGVRQKSSMGQGAIVGVLDTGVWPESPSFSDSKMPPIPQKWRGACQEGQDFNSSNCNRKLIGAKFFIKGHHVASSLPSDVAQEYVSPRDSHGHGTHTSSTAAGASIADASVFGNGAGVAQGMAPGAHIAVYKVCWFSGCYSSDIVAAMDSAIRDGVDILSLSLGGFPLPFFDDSIAIGSFRAVQHGISVVCAAGNNGPIQSSVANVAPWITTIGAGTLDRRFPAIIRLSNGEAIYGESMYPGNKFKQATKELEVVYLTGGQMGGELCLKGSLPREKVQGKMVVCDRGVNGRSEKGQIVKESGGAAMILANSEINLEEDLVDVHVLPATLIGFAEANRLKAYINTTSNPKARIQFGGTVIGRSRAPSVAQFSSRGPSLSNPSTLKPDVIAPGVNIIAAWPQNLGPTGLPQDSRRSNFTVMSGTSMACPHVSGITALIHSAHPKWTPAAIKSAIMTTADVTDHFGKQILDGNKPADVFAMGAGHVNPTKAIDPGLVYDIKPYEYIIHLCALGYTHSEIFIITHMNVSCHKILQMNKGFTLNYPSISVIFKHGTTSKMVSRRLTNVGSTNSIYEVKVTAPEGVRVRVKPQRLVFKHVNQSLNYKVWFMSEKGKEGRKVRFTEGDLTWIHCENSKYKVRSPIVVTWKN* | 769 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 17380867 | 17383173 | - | Chy4G078420.1 | Chy04g01124 | 225023 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy04g01124 | 768 | Pfam | Fibronectin type-III domain | 662 | 764 | IPR041469 | - | |
| Chy04g01124 | 768 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 110 | IPR037045 | - | |
| Chy04g01124 | 768 | Pfam | PA domain | 397 | 462 | IPR003137 | - | |
| Chy04g01124 | 768 | SUPERFAMILY | Subtilisin-like | 125 | 618 | IPR036852 | GO:0004252|GO:0006508 | |
| Chy04g01124 | 768 | SUPERFAMILY | Protease propeptides/inhibitors | 53 | 109 | - | - | |
| Chy04g01124 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 134 | 153 | IPR015500 | - | |
| Chy04g01124 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 544 | 560 | IPR015500 | - | |
| Chy04g01124 | 768 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
| Chy04g01124 | 768 | CDD | PA_subtilisin_like | 350 | 476 | - | - | |
| Chy04g01124 | 768 | Gene3D | - | 630 | 766 | - | - | |
| Chy04g01124 | 768 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.2 | 24 | 765 | - | - | |
| Chy04g01124 | 768 | Gene3D | - | 343 | 483 | - | - | |
| Chy04g01124 | 768 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 545 | 555 | IPR023828 | - | |
| Chy04g01124 | 768 | Pfam | Peptidase inhibitor I9 | 29 | 109 | IPR010259 | - | |
| Chy04g01124 | 768 | CDD | Peptidases_S8_3 | 107 | 581 | IPR034197 | - | |
| Chy04g01124 | 768 | Gene3D | Peptidase S8/S53 domain | 137 | 626 | IPR036852 | GO:0004252|GO:0006508 | |
| Chy04g01124 | 768 | Pfam | Subtilase family | 134 | 588 | IPR000209 | GO:0006508|GO:0008236 | |
| Chy04g01124 | 768 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 112 | 613 | - | - | |
| Chy04g01124 | 768 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 24 | 765 | IPR045051 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy04g01124 | Chy-Chr4:17380867 | Chy09g01158 | Chy-Chr9:13808660 | 0 | dispersed | |
| Chy04g01124 | Chy-Chr4:17380867 | Chy02g01279 | Chy-Chr2:9390286 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy04g01124 | - | - | csv:101222839 | 1534.24 |