Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g01144 | ATGGATTTCTGGCCGGAATTTCTCGCCAGCAGTTGGGGCAAAGAGTTCGTCGCCGGTGGAATTGGCGGTGTCGCTGGCATCGTCTCCGGTTACCCACTCGACACTCTTCGTATCCGCCAACAGCACTCCACCTCCGGCTCCGCCATCACCGTCCTCCGTAACATCATGTCCAACGGCGGACCCGCCGCTCTCTACAGAGGAATGGGAGCTCCTCTCGCTTCTGTCACTTTCCAGAACGCCATTGTTTTTCAAACCAACGCCGTACTCTGCAGAGCGTTCGATCCATCGGCGACGGACAACCGTCCACCGTCGTACAAGGCGGTAGCATTAGGCGGATTCGGCACCGGTGCACTACAGAGCTTAATTTTAACACCGGTTGAGCTGGTGAAAATCCGTCTTCAATTACAGGATTTGGGTTCATCAAATAACATAGATCTGAATTCATCTCGACGCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGTCTATACAGAGGGTTAACAATCACAATGCTAAGAGACGCTCCATCCCATTGTTTTTACTTTTGGACATACGAATTCATGAGAGAAAAGCTTCACCCCGGTTGCCGTAAAACAGGGCAAGAGACATTGAGAACGATGTTAGTTGCCGGAGGACTGGCCGGCGTTGCGAGTTGGGTTTGTTGTTACCCATTAGATGTGGTTAAAACTAGACTTCAAGCTCAATCGAAATTCAAGTTTCAAAAGTACAGTGGGATTGTAGATTGTTTCTATAAGAGTGTGAAAGAAGAAGGGTATAGTGTTTTATGGCGTGGATTAGGAACCGCAGTAGCTAGAGCTTTTGTGGTGAATGGAGCTATTTTTTCAGCTTATGAACTTAGTTTGAGGTGTTTGAACAACAATGGAGGGTTTCATGCTGAAAATACCATTTGA | 930 | 47.96 | MDFWPEFLASSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQHSTSGSAITVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPSATDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGSSNNIDLNSSRRGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRKTGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFKFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAVARAFVVNGAIFSAYELSLRCLNNNGGFHAENTI* | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17572895 | 17573969 | - | Chy4G078620.1 | Chy04g01144 | 225043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g01144 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 296 | IPR018108 | - | |
Chy04g01144 | 309 | Gene3D | Mitochondrial carrier domain | 9 | 304 | IPR023395 | - | |
Chy04g01144 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 197 | IPR018108 | - | |
Chy04g01144 | 309 | PRINTS | Mitochondrial carrier protein signature | 170 | 188 | IPR002067 | GO:0055085 | |
Chy04g01144 | 309 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085 | |
Chy04g01144 | 309 | PRINTS | Mitochondrial carrier protein signature | 118 | 136 | IPR002067 | GO:0055085 | |
Chy04g01144 | 309 | PRINTS | Mitochondrial carrier protein signature | 217 | 239 | IPR002067 | GO:0055085 | |
Chy04g01144 | 309 | PANTHER | CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN | 1 | 298 | - | - | |
Chy04g01144 | 309 | Pfam | Mitochondrial carrier protein | 11 | 92 | IPR018108 | - | |
Chy04g01144 | 309 | Pfam | Mitochondrial carrier protein | 212 | 300 | IPR018108 | - | |
Chy04g01144 | 309 | Pfam | Mitochondrial carrier protein | 109 | 198 | IPR018108 | - | |
Chy04g01144 | 309 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 1 | 298 | - | - | |
Chy04g01144 | 309 | SUPERFAMILY | Mitochondrial carrier | 11 | 291 | IPR023395 | - | |
Chy04g01144 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g00086 | Chy-Chr4:865893 | Chy04g01144 | Chy-Chr4:17572895 | 3.16E-18 | dispersed | |
Chy04g01144 | Chy-Chr4:17572895 | Chy06g02139 | Chy-Chr6:25728631 | 3.44E-52 | dispersed | |
Chy04g02272 | Chy-Chr4:27334889 | Chy04g01144 | Chy-Chr4:17572895 | 3.15E-14 | transposed | |
Chy01g02068 | Chy-Chr1:25492504 | Chy04g01144 | Chy-Chr4:17572895 | 9.97E-152 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g01144 | K15109 | - | csv:101222749 | 620.157 |