Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01164 ATGGAGATTCTAAGGACTCCATTTAGGGGTATTCTCAATGATATTAGAGGAAGAGCCGCCTGTTATAAACAAGATTGGATTGATGGTCGAATTTCAGGAATTGGAATTTTGGCCCCAACTGCTTATATTTTTTTCGCTTCTGCATTTCCTGTCATTGCTTTTGGTGAGCAATTGAGCCGAGATACAGATGGAAGATTGAGCACAGTAGAAACATTGGCTTCCACTGCCATTTGTGGTATCCTTCATTCAATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGGGTTGCAGAACCAACAATTATTATGTATACCTATTTGTACAATTTTTGCAAGGAAAGGGAAGATATAGGGGGAGATCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAATGCTTCCAGGCTTATCAACAAATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTAAAGTTCCTGAGACTGAGGATACAAGTTTAGAGAATTATCAATTTCATTGGGTTTACACCAATGGATTACTGGGAATCATTTTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCGTGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTGTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCGTTTGGAGTACCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCGCTGAACCATTGGACCATCGTCATGGACATGGGGAAGATACCTCCTGCATACATCTTTGCGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCACAGTGTTGCTTCTCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAGCCCTTCTGCTTACCACTATGACATTCTGTTGCTGGGATTTATGACATTGCTTTGTGGGTTGATCGGGCTTCCTCCTTCAAATGGGGTTTTGCCACAGTCCCCTATGCACACCAAGTGCCTTGCAACTCTTAGAAGGCGTTTGATGCGAAGAAAGATGGTAAAAAGTGCAAAGGAAAGCATAGAAAGAAAAGCTAGTGATTCCGAAATCTATGGCCAAATGCAAGCTGTGTTCTTAGAAATGGAAAGCAACCCAATTACGACAACAGTGGTCAAAGAGCTGGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAGTAAGGATGAAAATGCAAATGTCACATTCGACCCAGAGAAGCATATTGATGCTTATCTTCCCGTTAGAGTGAACGAGCAAAGGTTGAGCAATCTGTTGCAATCACTACTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGAAGATACCAACGTCAGTTCTCTGGGGATACTTCGCGTATATGGCCATTGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTATAAGGTCCTAGAAGGTTTTCATGCTTCTTTTGTGGAGTCTGTTCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATATTTCCTCCTTTGTTTTGGAGTGACTTGGATTCCCATAGCTGGAGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATCGGCATCAGACATCGTGTCCTTCCCAAGCTACTCCAGCCTCATTATTTGCAGGAGCTCGACGCAGTTGAGTACGAAGAAGTAACCGGTACCTCAGTTCTCTCGCTTAGCCTGTCTATCAAGGAAAAGAACTCCACTCATATAGTTGATAGCGAAGATGAAGTTAAAATATGTGATGCTGAAATACTTGATGAGTTGACAACCCATAGAGGGGAATTGAAAGTTAGAACTAAAAGCTTCAACGAGGATAGACACAATCAGATCCATCCTGACAAAAGGCATTGGTAA 2007 42.0 MEILRTPFRGILNDIRGRAACYKQDWIDGRISGIGILAPTAYIFFASAFPVIAFGEQLSRDTDGRLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKEREDIGGDLFLAWAGWVCVWTALLLFLLAIFNASRLINKFTRIAGELFGMLISVLFIQEAIKGVVSEFKVPETEDTSLENYQFHWVYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVVVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLNHWTIVMDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKSPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVKSAKESIERKASDSEIYGQMQAVFLEMESNPITTTVVKELEDLKEAVMKGESKDENANVTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLLCFGVTWIPIAGVLFPLPFFLLIGIRHRVLPKLLQPHYLQELDAVEYEEVTGTSVLSLSLSIKEKNSTHIVDSEDEVKICDAEILDELTTHRGELKVRTKSFNEDRHNQIHPDKRHW* 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17853799 17857894 + Chy4G078820.1 Chy04g01164 225063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01164 668 PANTHER BORON TRANSPORTER 4-RELATED 1 665 - -
Chy04g01164 668 Pfam HCO3- transporter family 189 374 IPR011531 GO:0006820|GO:0016021
Chy04g01164 668 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016021
Chy04g01164 668 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016021
Chy04g01164 668 Gene3D Helical hairpin bin 18 60 - -
Chy04g01164 668 PANTHER ANION EXCHANGE PROTEIN 1 665 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01147 Chy-Chr3:14739248 Chy04g01164 Chy-Chr4:17853799 0 dispersed
Chy04g01164 Chy-Chr4:17853799 Chy12g01265 Chy-Chr12:17230913 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01164 K24194 - csv:101210964 1251.11