Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01189 ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACAGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGATTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA 798 47.49 MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18266412 18267209 - Chy4G079070.1 Chy04g01189 225088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01189 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 2 265 - -
Chy04g01189 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Chy04g01189 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Chy04g01189 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
Chy04g01189 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01189 Chy-Chr4:18266412 Chy11g01011 Chy-Chr11:14276644 2.42E-168 dispersed
Chy04g01189 Chy-Chr4:18266412 Chy02g00166 Chy-Chr2:1171702 3.47E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01189 K08912 - csv:101203342 539.265