Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01193 ATGAGCTGCTTTAGCTGCTGTGAAGAAGATGAAATTCAGAAAGCAGCTGACAATGGAGGCATGTATGCAGGAAAGCAAAATACAGGAAACAATGGGGGTTATCATAAACCCGAAGCTGCACCAGCAGTCACTCAAGCTGTTAAAATGCAACCAATATTAGTTCCTACCATACCCATCGAAGAACTATCAGAAGTAACGGATAACTTTGGAAATGAAGCTTTGATTGGAGAGGGTTCATATGGGAGAGTATACTATGGTACGCTTAAAAACGGGCAGCCTGCAGCGATCAAGAAGTTAGATGCCAGCAAACAGCCTGATGATGAATTTTTAGCACAGGTCTCCATGGTCTCGAGGCTGAAGCACGGAAATTTTGTTCAATTGCTTGGTTATTGCGTTGATGGGAGTTCCCGCATACTAGTATACGAGTATGCTTCTAATGGATCACTTCATGATATTCTTCATGGAAGAAAAGGAGTGAAAGGAGCACAACCAGGTCCTGTTCTATCATGGGCACAACGTGTGAAAATTGCTGTAGGGGCTGCTAGAGGACTTGAGTATTTGCATGAAAAGGCTGAGTCCCACATTATCCATCGTGATATTAAGTCCAGCAATGTACTCATCTTTGATGATGATGTTGCTAAAATTGCTGACTTTGATTTGTCCAATCAAGCTCCTGATATGGCAGCACGTCTTCACTCTACCCGTGTTCTTGGAACCTTTGGTTATCATGCTCCTGAATATGCTATGACTGGTCAATTGAATGCCAAGAGTGATGTTTATAGCTTTGGTGTAGTCTTGCTTGAACTTCTGACAGGGAGAAAACCTGTAGATCCTACACTACCACGAGGACAACAAAGTCTAGTTACTTGGGCTACACCAAAGCTGAGTGAAGATAAAGTTAGGCAGTGTGTCGATTCAAGGCTTGGTGGAGAGTACCCCCCAAAGGCTGTAGCAAAGTTAGCAGCTGTTGCTGCCTTGTGTGTGCAGTATGAGGCAGATTTCCGGCCAAACATGAGCATTGTTGTCAAAGCTCTCCAGCATCTATTAAATGCCCGACCTGGACCGTCTGGTGATGCATCAAACTCGTAA 1089 43.99 MSCFSCCEEDEIQKAADNGGMYAGKQNTGNNGGYHKPEAAPAVTQAVKMQPILVPTIPIEELSEVTDNFGNEALIGEGSYGRVYYGTLKNGQPAAIKKLDASKQPDDEFLAQVSMVSRLKHGNFVQLLGYCVDGSSRILVYEYASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAESHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDPTLPRGQQSLVTWATPKLSEDKVRQCVDSRLGGEYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQHLLNARPGPSGDASNS* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18348402 18350956 + Chy4G079110.1 Chy04g01193 225092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01193 362 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Chy04g01193 362 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Chy04g01193 362 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01193 362 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01193 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Chy04g01193 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Chy04g01193 362 Gene3D Phosphorylase Kinase; domain 1 34 143 - -
Chy04g01193 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Chy04g01193 362 Gene3D Transferase(Phosphotransferase) domain 1 144 354 - -
Chy04g01193 362 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g01807 Chy04g01193 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01193 Chy-Chr4:18348402 Chy07g01432 Chy-Chr7:18834589 8.24E-168 dispersed
Chy01g01807 Chy-Chr1:23611503 Chy04g01193 Chy-Chr4:18348402 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71198 PF07714 PK_Tyr_Ser-Thr 1.20E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01193 K13436 - csv:101223136 711.064