Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01198 ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGAAAAGGAGCGTATGGGCGAGTCTATAAGGGTCTGGATTTGGAGAATGGGGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGCAAGAGATTGACTTACTGAAGAACTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTTTGAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAATGGATCACTTGCCAACATCATCAAGCCAAATAAGTTTGGACCTTTTCCAGAATCGTTGGTTGCTGTTTATATTTCTCAGGTTTTGGAAGGGTTGGTTTATCTACACGAGCAGGGTGTAATTCATCGGGACATTAAGGGTGCGAACATACTGACAACCAAGGAGGGCCTTGTGAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAGGCCGATGTTAATACTCATTCGGTTGTTGGAACACCTTACTGGATGGCACCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCCGATATATGGAGTGTCGGATGTACAGTGATTGAACTGCTTACATGCGTACCTCCATATTATGATCTACAACCTATGCCTGCTCTCTTTCGCATTGTACAAGACAAGCATCCTCCAATTCCGGACAGCCTATCACCAGATATCACTGATTTTTTACGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGACCTGATGCAAAAACTTTGCTTTCTCATCCTTGGATACAGAACTGTCGGCGGGCTTTGCATTCTTCTCTTCGTCATAGTGGCACATTGAGAAACACCCAACAAGATGGATCAATTGAAGCAGAAATTTCTAATGGAGACAATCAAAACTCTTGCGAAATCCCTTCGGCAGAGAAAAATGAAGTCGCTGATTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGTCATCAGATGTCGCCACTGATGTGAGCAAGTCCCAAAAGCATTTTGCTTCAGGCCCTAATTTTGTTGAGGAAGGAGAAAGCCTAGAAGAAGATACTCTATTGGATCAAGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACCGGTTCTGGCAGACTTACTACCTCTGGGCCGACTGAGTTTCATGAATCTCATGGTAGAGCCCATGATGAAGTGATAATGAATGGCGAAGTTCCGTTGACAGAATTAAGGAAAGACGCTTCTAGAAAACTAGGAGAGCAAGAAACTTCTACAACATCTGGAAGGAGATCATTTGGTTTTGAACCTGAAAGTCAGGATAATAGTTTTCAAAAGGTGTCAAAGATGTCGGTTGCTTTGGGAGGAGATGAGCTGAGTAAATTTAGTGACACTCCTGGAGATGCTTCCTTAGATGATTTATTCCAACCTCTAGATAAGCGCTCTGGGGATCAAGCTACTGGAGCATCAACATCTCTATCTATTCTACAATCAAACATGGGTAATGTGCCAGTCAATGATGTTGGGAAAAATGACCTGGCCACGAAGTTGAGGGCTACAATTGCTCAAAAACAAATGGAGAATGAAATGGGGCAGGCAAGTGGTGGGGGTGACCTGATTCGACTAGTGATGGGCGTTTTGAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCCGGAGAAACACTTTTTCCTTTGCAGGCTGTTGAATTCGGCAGATTAGTTGGGTCGTTGAGACCTGATGAACCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATAGCTATCTTTCATCAAAGACCTGAGCAGAAAATTGTATATGTTACACAGCATGGCCTACTCCCATTAACTGAGTTGCTTGAAGTTCCTAAAACTCGTATTATATGTTCGGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAATGTTGACTTCCAAGAAAATGCCTGTCTTGTCGGTATGATTCCTCTGGTAATGGGCTTCGCAGTTCCGGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTCTTTCAACAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTCGCATGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCTGATTATGCAAAGTACAGGGTCATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTAGAAATGGTTTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACCCTCTACAGCTTGAATGAGGCAACTCTCTTAGCTTCCATAACAGTTGGGGCAGGATATCCAGTTGATGGTTTAACTCCACGGCCACGATCTGGTCAACTAGATCCTAGCCACCCTATATTCAGTCAGTATGAGGCCTCGTTCCCTATGCCTGATCAACCTGATCTTTTGAAGGTCAGGCATGGTATAGTTGATCATCACTCGTCTACTGGACCACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATACCAATCAATCTGATTATCGACATTTTCCCATGGATACTGATAGGCCTCAATCTAGCAATCCCACAAATGAAGGCCTGGGATCTAAACCGTCAGAGCTTGCATCTTTGGACAAAGTTTTACATTTAGCAAGCAAGGAACCTTCTGGCTCGGCTTCCAAAGAACATGAAAATGCAGATAGATGGAGAACTGAGAGAATGGCCAACTCTAATAGGACTTCCACAGATAGGCCTCCGAAATTTGTGGAACCTGCATCTAATGGATTTTCTACAACATTGGCGGCCACTCAGCAAGAGCAAGTTCGACCCCTTCTAAGTCTGTTGGACAAAGAGCCCCCGTCTCGACATTTTTCTGGTCAGCTCGAGTACATGCGCCAACTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTACATGCATCAAATGAAAAGAAGATAAATGGGGAACCTGATTTCTTAATGGCAGAATTCGCAGAGGTCTCCCAACGTGGAAAAGACAATGCAAACCTTGACCCCACTTCTAAGGTTTCTCTTAAAACGGCAGCAAAGAAGGTAGGGCCCCTGATTTCCAATGAAGGAGCTGCATCCACATCTGGAATTGCTTCACAGACAGCTTCTGGAGTACTTTCAGGTTCGGGTGTATTAAATGCTAGACCTGGGAGTGCAACATCCTCTGGACTTCTTTCACACATGGTGTCAACTCTGAACGCTGATGTTGCAAGGGAATACTTGGCGAAGGTGGCTGATCTATTGCTTGAGTTTGCTCAGGCAGATACAACTGTGAAGTCATATATGTGCAGCCAAAGCTTACTTAATCGCCTTTTCCAAATGTTCAATAGGGTAGAGCCTTCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAATTGCTTAGAAAATCTTCAGCGAGCGGATGCAATTAAATATTTGATTCCGAACCTTGAACTCAAAGAAGGGTCACTGGTGTCACAAATACATACTGAGGTTCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGAAGACAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTAATGCATTTTATTATATCAGACTCTCCTCTGAAACAATATGCATTGCCTCTGCTGTGTGATATGGCCCATGCATCTCGTAATTCCAGGGAGCAGTTAAGAGCCCACGGCGGATTAGATGTTTATTTGAGCCTACTTGAAGATGACCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAACCGAAAAGTTGAGCAAGCTTTGCTCAAAAAGGATGCAATTCAGAAATTGGTTAAGTTTTTCCAGTGCTGTCCAGAACAACATTTTGTCCATATTTTGGAGCCGTTCTTGAAAATCATCACGAAATCTTCCCGAATCAATACGACATTGGCTGTCAACGGATTGACCCCATTGCTTATAGCAAGACTAGACCACCAAGATGCAATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCGGTGTATGAGCATCATCCACGACCCAAGCAGTTGATTGTCGAGAATGATTTACCTCATAAACTTCAAAATTTGATTGAGGAACGTAGGGATGGACAACGATCTGGAGGGCAAGTGTTGGTGAAGCAAATGGCAACATCTCTCCTTAAAGCTCTTCATATAAATACCGTTTTGTAA 4269 42.42 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLRNTQQDGSIEAEISNGDNQNSCEIPSAEKNEVADSDFKADSRKELSSDVATDVSKSQKHFASGPNFVEEGESLEEDTLLDQVPTLSIHENSSLLTGSGRLTTSGPTEFHESHGRAHDEVIMNGEVPLTELRKDASRKLGEQETSTTSGRRSFGFEPESQDNSFQKVSKMSVALGGDELSKFSDTPGDASLDDLFQPLDKRSGDQATGASTSLSILQSNMGNVPVNDVGKNDLATKLRATIAQKQMENEMGQASGGGDLIRLVMGVLKDDDIDIDGLVFDEKLPGETLFPLQAVEFGRLVGSLRPDEPEDVIVSACQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNVDFQENACLVGMIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYRVMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATLLASITVGAGYPVDGLTPRPRSGQLDPSHPIFSQYEASFPMPDQPDLLKVRHGIVDHHSSTGPPEPSRASTSHSQRSDTNQSDYRHFPMDTDRPQSSNPTNEGLGSKPSELASLDKVLHLASKEPSGSASKEHENADRWRTERMANSNRTSTDRPPKFVEPASNGFSTTLAATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRQLSGLERHETIMPLLHASNEKKINGEPDFLMAEFAEVSQRGKDNANLDPTSKVSLKTAAKKVGPLISNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPSILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDDLWSVTALDSIAVCLAHDNDNRKVEQALLKKDAIQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL* 1423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18401444 18431058 + Chy4G079160.1 Chy04g01198 225097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01198 1422 Gene3D - 1073 1417 IPR011989 -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 841 856 - -
Chy04g01198 1422 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1378 - -
Chy04g01198 1422 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Chy04g01198 1422 MobiDBLite consensus disorder prediction 288 317 - -
Chy04g01198 1422 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01198 1422 MobiDBLite consensus disorder prediction 869 885 - -
Chy04g01198 1422 Gene3D Transferase(Phosphotransferase) domain 1 17 315 - -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 320 340 - -
Chy04g01198 1422 SMART arm_5 616 656 IPR000225 GO:0005515
Chy04g01198 1422 SMART arm_5 1202 1241 IPR000225 GO:0005515
Chy04g01198 1422 SMART arm_5 1156 1200 IPR000225 GO:0005515
Chy04g01198 1422 SUPERFAMILY ARM repeat 589 1309 IPR016024 -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 431 454 - -
Chy04g01198 1422 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Chy04g01198 1422 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Chy04g01198 1422 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Chy04g01198 1422 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Chy04g01198 1422 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01198 1422 PANTHER MAP KINASE KINASE KINASE 2 1378 - -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 904 922 - -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 380 454 - -
Chy04g01198 1422 CDD STKc_Cdc7_like 19 274 - -
Chy04g01198 1422 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 833 886 - -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 469 499 - -
Chy04g01198 1422 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01198 1422 MobiDBLite consensus disorder prediction 899 937 - -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 288 359 - -
Chy04g01198 1422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Chy04g01198 1422 Gene3D - 582 785 IPR011989 -
Chy04g01198 1422 MobiDBLite consensus disorder prediction 380 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02291 Chy-Chr2:26969689 Chy04g01198 Chy-Chr4:18401444 1.69E-25 dispersed
Chy04g01198 Chy-Chr4:18401444 Chy05g00223 Chy-Chr5:1844743 3.92E-72 dispersed
Chy09g00338 Chy-Chr9:2955913 Chy04g01198 Chy-Chr4:18401444 4.39E-43 dispersed
Chy04g01198 Chy-Chr4:18401444 Chy09g01038 Chy-Chr9:12879506 2.05E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71199 PF00069 Pkinase 1.30E-72 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01198 - - csv:101206469 2765.72