Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01221 ATGTTGAGCTCCGGAAACCTCACCGTTATCTCCTCCGGTGAATTCCCATCTCAGAGATTGGTTGCATGGAAACTCTTCTTCTTACCCGACATTCAAATGTTAGAGACACTCATAGCAATTTTTATTTTTACAGCAATAAGATCATTGAGGCAAAAAAGAAAACAGGGGCTACCTGTGTGGCCGGTTGTCGGAATGTTACCGTCTTTAGTCACTGGACTCCGAAGCAACTTGTATGAATGGATCACCGAAGTGCTATGCCGTCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTCAGTAGCTTGAATTGTGTTGTAACTTCAGATCCTCGTAACATTGAGCACATTCGGAAAACAGAGTTTCTCAAGTACCCAAAAGGCTCTTTCTTCCGTGAAACAGTCCATGACCTTCTCGGCGACGGAATCTTCAACGCCGACGGCGAGATTTGGCACAAGCAGAGGAAGACAACCAGCATCGAATTCCATTCAGCAAACTTCCGACAACTCACTGTGGAGTCCCTCCACGAGTTAGTCCACTCTCGGCTCCTCCCTATTTTAGACAGACATTTCGTCGAACACTTGGTGCCCATTGATCTCCAAGACATTCTTCTACGCCTAACATTCGACAATGTCTGTATGATCGCATTCGGCGTTGAACCCGGCTGTTTGAACCCTAATTTACCAGTGATTCCCTTCGCCCACGCCTTCGAGGTGGCAACGGAAGCGACCGTTCTTCGATTCGTAACACCGCAATTCTTATGGAAAACAATGAGGCATTTCAATTTAGGAACAGAAAAGAGTCTCAAATTCGCCCTAGAAGAGGTCAATGAATTCGCAATGAACGTAATTGAAAAGATAAGAAGAGTTGTCAATGAAATCGAGAGATCGGACCTGTTATCAGTGTTTACGGGACAGAAGGACGAGAACGGGGAGCCGTATTCGGACAAGTTCTTGAAAGATATATGCGTGAATTTTATACTTGCCGGAAGAGATACGTCGTCAGTGGCGTTGAGTTGGTTCTTTTGGCTGATTGATCGAAATCCAGAAGTGGAAGAGAGAACTCTGGAGGAGATCTGCCGGATATTGAAGAAGAGAGGAGAGGCGGCGGGGGAATCGTCGGCCGGCAATGTGAAGTTTGAGGTAGAAGAGATAAAGAAAATGGAATATTTGCAAGCCGCTCTTTCTGAAGCTTTGAGATTGTTCCCTTCTGTGCCTGTTGATCACAAGGAGAATGGAGGCAATATGGGGAAAGATTGCTATGAATTCAAGCCAGAGAGATGGTTAAGAGATGGTCGATTTACGGCTGTGTCAGTGTATCGATTCACGCCTTTCAACGGGGGCCCTCGATTATGCTTGGGAAAGGATTTTGCATACTACCAAATGAAGTACATTTCTGCCTCTGTCATCCTCCGCTACCGTGTTAGAGTGGCAGAGAAGCACCTTGTGGTACCAAACCTTGCTTTGACAATGTACATGAAATATGGCTTAAAGGTGAATTTGTTCAAACGTGACAAGAAAGAGATTGAAAAGAACTTCAAAACTAAATAA 1548 44.9 MLSSGNLTVISSGEFPSQRLVAWKLFFLPDIQMLETLIAIFIFTAIRSLRQKRKQGLPVWPVVGMLPSLVTGLRSNLYEWITEVLCRQNGTFRFKGPWFSSLNCVVTSDPRNIEHIRKTEFLKYPKGSFFRETVHDLLGDGIFNADGEIWHKQRKTTSIEFHSANFRQLTVESLHELVHSRLLPILDRHFVEHLVPIDLQDILLRLTFDNVCMIAFGVEPGCLNPNLPVIPFAHAFEVATEATVLRFVTPQFLWKTMRHFNLGTEKSLKFALEEVNEFAMNVIEKIRRVVNEIERSDLLSVFTGQKDENGEPYSDKFLKDICVNFILAGRDTSSVALSWFFWLIDRNPEVEERTLEEICRILKKRGEAAGESSAGNVKFEVEEIKKMEYLQAALSEALRLFPSVPVDHKENGGNMGKDCYEFKPERWLRDGRFTAVSVYRFTPFNGGPRLCLGKDFAYYQMKYISASVILRYRVRVAEKHLVVPNLALTMYMKYGLKVNLFKRDKKEIEKNFKTK* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18752791 18754655 - Chy4G079390.1 Chy04g01221 225120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01221 515 Gene3D Cytochrome P450 47 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PANTHER CYTOCHROME P450 86B1-LIKE 21 410 - -
Chy04g01221 515 PANTHER CYTOCHROME P450 86B1-LIKE 415 504 - -
Chy04g01221 515 Pfam Cytochrome P450 421 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 Pfam Cytochrome P450 56 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 SUPERFAMILY Cytochrome P450 56 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Chy04g01221 515 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PANTHER CYTOCHROME P450 21 410 - -
Chy04g01221 515 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01221 515 PANTHER CYTOCHROME P450 415 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01221 Chy-Chr4:18752791 Chy09g01238 Chy-Chr9:14437368 9.77E-128 dispersed
Chy01g01820 Chy-Chr1:23717694 Chy04g01221 Chy-Chr4:18752791 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01221 K15402 - csv:101222831 720.309