Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01284 ATGGCGTTCGCTAGTCGCATCAGATCAACCATCCCTGTCCTCACCAAGCTCTCAAGAACTTATACCGCTGCATCAGGGAGATATGAAGGAAAAGTGAAGGTGCCTATTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATCTAGCTGCAGTAAAAGCTAATTCTTTAGACAAGGTGGAGTCTGAACTTGTTAACCTTGTCCAAGCTGTTAAGAAAAGCCCTACATTTTCTCAGTTCACAATGGACCTGTCAATTCCAGCGAAAACTAGAGTTAAGGCTATCAATGAAATTTCTGCTGAAGCTAAATTTTCAGACATTGTAAAGAACTTTTTGGGTAGGATTGTTTGCTCTTCTGTGATTGTGTGGATGAAAACTGACTTTAGCTTTGGCTCCTTTTGTGAGGCACAAATTTTGTCCTGGCTGAGATATGTAGATAGCATAGCAAAGAAATTTTTGGAGTTGACCATGGCTCATAGGGGAGAAGTTAAAGCCATTTTTACAACTGTTATTCCCATTCCAGCACAAGAAGAGAAAGAATTGAAGGAGACAATGCAAGATATAATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAGAAGATCGATCCCAACATCCTTGGTGGTCTAGTTGTAGAGTTTGGCGAGAAGGTGTTTGATATGTCCATTAAAACACGGTCACGTCAAATGGAGAGGTTCTTGCGCCAACCTGTAACTCTTGATGGTCTGTGA 735 41.9 MAFASRIRSTIPVLTKLSRTYTAASGRYEGKVKVPIALFGGSGNYASALYLAAVKANSLDKVESELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAINEISAEAKFSDIVKNFLGRIVCSSVIVWMKTDFSFGSFCEAQILSWLRYVDSIAKKFLELTMAHRGEVKAIFTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRSRQMERFLRQPVTLDGL* 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19377375 19380141 - Chy4G080020.1 Chy04g01284 225183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01284 244 Gene3D - 42 121 IPR026015 -
Chy04g01284 244 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 42 117 IPR026015 -
Chy04g01284 244 Hamap ATP synthase subunit delta [atpD]. 37 237 IPR000711 GO:0015986|GO:0046933
Chy04g01284 244 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 197 216 IPR020781 GO:0015986|GO:0016020|GO:0046933
Chy04g01284 244 Pfam ATP synthase delta (OSCP) subunit 144 233 IPR000711 GO:0015986|GO:0046933
Chy04g01284 244 Pfam ATP synthase delta (OSCP) subunit 43 115 IPR000711 GO:0015986|GO:0046933
Chy04g01284 244 PANTHER ATP SYNTHASE DELTA CHAIN 13 237 IPR000711 GO:0015986|GO:0046933
Chy04g01284 244 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 13 237 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g01866 Chy04g01284 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01866 Chy-Chr1:24086489 Chy04g01284 Chy-Chr4:19377375 3.44E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01284 K02137 - tcc:18614630 294.278