Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01331 ATGGAGAAGAAGACTTATCCCATAGGTGAAGATTCTTATATTCTATATGAAGAGGTTGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTCAATGAAATCGTCGCCATCAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCATCCGAATGTCCTTAAATCACACTGCTCCTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAGGTCGTGATAGCAACAGTATTGCGAGAAGTATTAAAGGGAGTTGAATATCTTCATAATCATGGACATATTCATCGGGATATAAAAGCAGGGAATGTTCTTATTGATTCACGTGGTGGAATCAAGCTAGGAGACTTTGGTGTTTCTGCTTGCCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCCCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAATGCACCTCCAGGGCTTGATTATGAGAGAGATAAAAAATTTTCAAAGTCTTTCAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAAGTAAGCTGCTAAAGCATTCTTTTTTTAAGCAAGCCCGGTCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAGGAAGAAGATATGCTAGCACAAAAGAAAATTTCAGATGGAAAAAAGGAAGAATTATCACAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATTAGTGAAATGAGTGAAGTAGGGAGCTCAAATTCATTGAATGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATGTTGAAGAGAATGCCATGCTCCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAAATGGTAAAAAATCTATCAATGAATCAACAATTATTGGTTCTTGCTCCCAACATCAGTCTTCACCCCGCCATGATAATCAAACTGAGAATGGCTCCAATGAAGAGGTTAATTTGGAGAGCAGCAGAAGAATTTTGGGGAATACTCCTAATACTATCCAACATAAAAGAAGTATTTCTTCTAATACCTCTATTCAACAAGAAGTCAGTTTGCCTCTGAACAGAAGAGAGAGTTACGAGATGGAAAAGAATGGTGCAAACGGCAGTCCTGCAATGGGAGTGACTTCCCAGGCTGTAGATGATGCACTTTCTGATTCTCAGTCTAAAGATCCCAAATCATCATTAAGTCCAGCAATAACTGAAGAGGAACAGGATGAGAAAGCGAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACTTCGGAGAGTGTCGATCTAGAAAAGGCAGCGGCATCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTGATTACCTCAAATTGTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAAGCAAATCTCAACTGGAGAAGTTTCAGCAGATGGCGTAGTTGATGTCTCAGCGGCACATATAACAGCAACGGAGAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGTATGTTCATTTTTGA 2043 40.82 MEKKTYPIGEDSYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNVLIDSRGGIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKISDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEMSEVGSSNSLNALDVQEKKLQGQNSSEISDVEENAMLRRQPSMKANDTVNGKKSINESTIIGSCSQHQSSPRHDNQTENGSNEEVNLESSRRILGNTPNTIQHKRSISSNTSIQQEVSLPLNRRESYEMEKNGANGSPAMGVTSQAVDDALSDSQSKDPKSSLSPAITEEEQDEKAKAPVIQQKGRFKVTSESVDLEKAAASPILQKSHSMQVITSNCATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMKQISTGEVSADGVVDVSAAHITATEKSLLEAAHEREKDLLNEVTELQWRYVHF* 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19856048 19863683 + Chy4G080490.1 Chy04g01331 225230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01331 680 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01331 680 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01331 680 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 675 - -
Chy04g01331 680 MobiDBLite consensus disorder prediction 375 479 - -
Chy04g01331 680 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01331 680 Gene3D Transferase(Phosphotransferase) domain 1 94 328 - -
Chy04g01331 680 Coils Coil 656 676 - -
Chy04g01331 680 MobiDBLite consensus disorder prediction 504 535 - -
Chy04g01331 680 MobiDBLite consensus disorder prediction 398 478 - -
Chy04g01331 680 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Chy04g01331 680 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 675 - -
Chy04g01331 680 CDD STKc_OSR1_SPAK 11 274 - -
Chy04g01331 680 MobiDBLite consensus disorder prediction 504 523 - -
Chy04g01331 680 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Chy04g01331 680 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01331 Chy-Chr4:19856048 Chy09g00338 Chy-Chr9:2955913 0 dispersed
Chy04g01331 Chy-Chr4:19856048 Chy06g00495 Chy-Chr6:3358171 1.50E-105 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71202 PF00069 Pkinase 2.20E-58 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01331 K08835 - csv:101211076 1283.09