Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01344 ATGCCGATCGACACGACCGCAGTTTCCAGTGATCAAATTGTTTGCGTCACCGGTGCCGGAGGCTTCATTGCTTCGTGGCTTGTAAAGCTTCTTCTTGAGAAGGGATACACTGTTAGAGGAACTGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGACAAACTTACAAGGAGCTAAAGACAGGCTTTCTTTGTTTAGTGCTGATCTTCTTGATTTTAAAAGCCTTCAAGCAGCCATTACCGGTTGTCATGGCGTTTTCCACACCGCCTCTCCGGTCACCGACGATCCTGAAAAGGTGGAACAAGCGATAATCGGAACAAAGAACGTCATGACCGCCGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTCGATTGGAACTGTCTACATGAACCCTAACCGAAGCCCGGACACGGTCGTAGACGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAATACAAAGGTAATTGGCTTGATAATAATTCCCTTAACATATGAAAGTAGTAAGTTTATGATACGAATACCGAAGGAGTGGAGGATATTAAATTAG 561 45.1 MPIDTTAVSSDQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLTNLQGAKDRLSLFSADLLDFKSLQAAITGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLEFCKNTKVIGLIIIPLTYESSKFMIRIPKEWRILN* 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20058566 20059316 - Chy4G080620.1 Chy04g01344 225243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01344 186 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 161 IPR036291 -
Chy04g01344 186 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 159 - -
Chy04g01344 186 Pfam NAD(P)H-binding 18 137 IPR016040 -
Chy04g01344 186 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 159 - -
Chy04g01344 186 Gene3D - 4 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01344 Chy-Chr4:20058566 Chy05g00142 Chy-Chr5:1092091 1.88E-45 dispersed
Chy04g01344 Chy-Chr4:20058566 Chy04g01345 Chy-Chr4:20072762 1.00E-90 tandem
Chy06g01607 Chy-Chr6:18532215 Chy04g01344 Chy-Chr4:20058566 1.62E-28 transposed
Chy01g01946 Chy-Chr1:24682619 Chy04g01344 Chy-Chr4:20058566 3.12E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01344 K09753 - csv:101218838 317.775