Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01345 ATGCCCCTCGCTGCCTCTGTAGCTTCCGGTCAAACTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTCAAGCTTCTTCTTCAAAAGGGTTACATTGTCAGAGGCACGGTGAGAAACCCAGATGATCGGAAAAATGATCATTTGAAAGAGCTGGATGGAGCTGAGCAAAGGTTGACGCTGTACGGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCCGCCATTAACGGTTGCGATGGTGTTTTCCACACGGCGTCTCCGGTGACCGATGACCCAGAAAAGGTGGAGCAGGCAATATTTGGGACAAAAAATGTTATAATGGCGGCGGAGGAGGCCAAGGTCCGACGAGTGGTGTTCACATCATCGATTGGAACTATATACATGAACCCCAATCGGAGCCCTGACACGGTGGTGGATGAGTCTTGTTGGAGTGATCTCGACTATTGCAAAAATACTAAGAATTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAAAGGAGAAAGGGGTGGATCTAGTTGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAACAATCAATAAATGCAAGTGTTGCTCATATCATGAAGTACTTGACTGGCTCTGTCAAGACTTATGTCAATGCAGTTCAAGGGTATGTTCATGTCAAGGATGTTGCAAAAGCTCACTTGTTGGTGTACGAGACTCCCTCTGCCTTTGGTAGATACATTTGTGCTGAAACTATGCTTCATCGAGGAGAATTAGTAGACATTTTGGCTAAGTTCTTCCCTGAGTATCCCATACCTACCAAGTGCTCTGACCAGGTGAACCCTAAGAAGAAACCTTACAAATATAGTGTGAAAAAGCTGAAGGACTTAGGCATGGAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGCCTTCAAGAGAAGGGTCATCTTCCACTTCCTGCTTAA 978 45.6 MPLAASVASGQTVCVTGAGGFIASWLVKLLLQKGYIVRGTVRNPDDRKNDHLKELDGAEQRLTLYGADLLDFESLKAAINGCDGVFHTASPVTDDPEKVEQAIFGTKNVIMAAEEAKVRRVVFTSSIGTIYMNPNRSPDTVVDESCWSDLDYCKNTKNWYCYAKTVAEQTAWAMAKEKGVDLVVVNPMLVLGPLLQQSINASVAHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLVYETPSAFGRYICAETMLHRGELVDILAKFFPEYPIPTKCSDQVNPKKKPYKYSVKKLKDLGMEFIPVKQCIYETVKSLQEKGHLPLPA* 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20072762 20077211 - Chy4G080630.1 Chy04g01345 225244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01345 325 CDD FR_SDR_e 13 298 - -
Chy04g01345 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 322 - -
Chy04g01345 325 Pfam NAD dependent epimerase/dehydratase family 13 242 IPR001509 -
Chy04g01345 325 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 322 - -
Chy04g01345 325 Gene3D - 4 325 - -
Chy04g01345 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 316 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01946 Chy-Chr1:24682619 Chy04g01345 Chy-Chr4:20072762 0 dispersed
Chy04g01345 Chy-Chr4:20072762 Chy05g00142 Chy-Chr5:1092091 2.09E-99 dispersed
Chy08g00745 Chy-Chr8:15178278 Chy04g01345 Chy-Chr4:20072762 2.73E-06 dispersed
Chy04g01344 Chy-Chr4:20058566 Chy04g01345 Chy-Chr4:20072762 1.00E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01345 K09753 - csv:101219069 643.654