Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01358 ATGATTTCTGAAGTTGAAGTTACTTCAACTACAAGATTGAAGAAATGGGCTTCTCATAATGATATAGTTGAATTGAAGGATGAGATTGCAAATATGATTTTTGATTTAAGTGCAAAGAGATTAATTAGTTATGATCCAGAGAAGTGTGGAGAAAATATGAGAGAGAACTTTGTTGCATTCATTCAGGGTTTGATCTCTTTCCCTATTGATATTCCTGGAACCTCTTACCACAAATGCTTACAGGGTAGAAAAAGAGTAATGAGGATGCTGGAAAATATGCTAAAAGAAAGACAGCAAAACCCAAGGGAACATCAAGTTGATTATTTTGATTTCGTTATTCAAGAACTTAGAAAAGATGGAACTCCTCTCACACAACAAGTTGCTTTGGACTTGATCTTTTTGCTTCTCTTTGCAAGCCATGAAACCACTTCTATTGCTTTGACTTTAGCCATCAAATTTCTCACAGACCATCCCCACGTCTTAAACCAGTTAACGGCTGAACATGAGGGAATATTGAAGAAGAGGAAAAATAAAAGTGATAAGCTTAGTTGGAACGAATACAAATCCATGACATTTACATTCAAGTTTATGAACGAAACATTGAGGTTGGCAAATATTGCTCCAGGGATATTTCGAAGAGCATTAAGAGACGTTGAGTTCAAGGGATACACGATCCCAGAAGGGTGGGCTGTGATGGTATGTCCTCCGGCCATTCATTTGGATCCAAATGCTTTCGCTGACCCACTTACCTTCAACCCATGGCGATGGGATGATGGGGCATCGAAGAATTTCATGGCATTTGGTGGTGGAATCAGATTTTGCATTGGCGCTGACTTTGCCAAATTGCAAATGGCTGTGTTTCTCCATCACTTGGTTACCAACTACAAGTTGAAGCCAATTAAAGGAGGCAATATTGTTCGAACCCCAGGCGTTCAATTTCCTGATGGCTTTCACGTTCAGATCCTAAAGAAAGATTAG 978 39.06 MISEVEVTSTTRLKKWASHNDIVELKDEIANMIFDLSAKRLISYDPEKCGENMRENFVAFIQGLISFPIDIPGTSYHKCLQGRKRVMRMLENMLKERQQNPREHQVDYFDFVIQELRKDGTPLTQQVALDLIFLLLFASHETTSIALTLAIKFLTDHPHVLNQLTAEHEGILKKRKNKSDKLSWNEYKSMTFTFKFMNETLRLANIAPGIFRRALRDVEFKGYTIPEGWAVMVCPPAIHLDPNAFADPLTFNPWRWDDGASKNFMAFGGGIRFCIGADFAKLQMAVFLHHLVTNYKLKPIKGGNIVRTPGVQFPDGFHVQILKKD* 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20218963 20220806 - Chy4G080760.1 Chy04g01358 225257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01358 325 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 1 322 - -
Chy04g01358 325 Pfam Cytochrome P450 59 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PANTHER CYTOCHROME P450 26 1 322 - -
Chy04g01358 325 PRINTS E-class P450 group I signature 127 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS E-class P450 group I signature 147 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS E-class P450 group I signature 274 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS E-class P450 group I signature 234 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS E-class P450 group I signature 264 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 Gene3D Cytochrome P450 1 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 SUPERFAMILY Cytochrome P450 12 321 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS P450 superfamily signature 265 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS P450 superfamily signature 138 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 PRINTS P450 superfamily signature 195 206 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01358 325 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 267 276 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01358 Chy-Chr4:20218963 Chy06g01966 Chy-Chr6:23691853 6.77E-178 dispersed
Chy04g01358 Chy-Chr4:20218963 Chy01g02211 Chy-Chr1:26589152 1.11E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01358 - - csv:101209116 647.506