Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01361 ATGAGCCGGTTTAGGAAGATGCGAGATTTAAAACTCAGCTCCCTGCCAACTTCCACGAGCTTCTGGATAATTCGCTCAGGCAGAAGGAACCTTCAAGAATGGCGGATTTTTGCGCAAAACGAGCCTCTTCTTCTTAGCAAAAACTGGGTTAATTCAAGCTATATCTTATTTTACGTCAACACGCCAGTTGAGTTGTGGCAACTTGAGGATCAAACCCCCCTTCAAAGACCTTCCAAAAGACACCATGGATCTGCTGTCTTCACGCTTCGGGAAATGGAAGACGCTACAAGCTCCTTTAGCGATGCCAACTTGCTCGGCAAAGGTGGCTTTGGACGAGTTTATCGAGGTACCTTGCGATCTGGAGAGGTAGTAGCAATAAAGAAAATGGAGATGCCAGCATTTAAGGAAGCAGAAGGAGAGCGTGAGTTCAGAGTGGAAGTTGACATTTTGAGCAGATTGGACCATCCAAATCTTGTTTCCTTAATTGGTTACTGTGCTGATGGCAAGCATCGCTTTTTAGTTTATGAATATATGCATAAAGGAAACTTACAACATCATTTAAATCATAACGGAATTGGATCAGAAGCAAAAATGGATTGGGAAAGGAGGTTGAAAGTGGCACTTGGAGCAGCAAAAGGACTTGCTTATCTTCATTCAACTTCAGCTGCTGGAATGCCAATTGTCCATAGGGATTTCAAATCCACTAATATTCTTCTCGACTCCAACTTGGATGCAAAGATATCAGACTTTGGGCTAGCAAAGTTTATGCCAGAAGGACAAGAATCACATGTGACTGCAAGAGTCCTCGGAACATTTGGATACTTTGACCCTGAATATACTTCGACAGGGAAACTGAGCTTGCAAAGTGATGTGTATGCATTTGGAGTGGTTCTTCTTGAGCTGCTCACTGGCCGCAGAGCAGTCGACTTGAACCAAGGCCCCAACGATCAAAACCTTGTCTTACAGGTAAGACACATATTGAATGATCGAAAAAAATTACGTAAGGTGATAGATCCAGAAATGAGTCGAAGTTCATATACAATGGAATCTATAGTCATATTTGCAAACCTTGCTTCACGTTGTGTACGAACAGAGAGTAGTGACAGACCAACAATGGCAGAATGCGTAAGGGAGCTCCAAATGATTATCTACACAAAGTTGCAAATGCGCAAGGCCTAA 1179 42.92 MSRFRKMRDLKLSSLPTSTSFWIIRSGRRNLQEWRIFAQNEPLLLSKNWVNSSYILFYVNTPVELWQLEDQTPLQRPSKRHHGSAVFTLREMEDATSSFSDANLLGKGGFGRVYRGTLRSGEVVAIKKMEMPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHKGNLQHHLNHNGIGSEAKMDWERRLKVALGAAKGLAYLHSTSAAGMPIVHRDFKSTNILLDSNLDAKISDFGLAKFMPEGQESHVTARVLGTFGYFDPEYTSTGKLSLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMSRSSYTMESIVIFANLASRCVRTESSDRPTMAECVRELQMIIYTKLQMRKA* 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20276931 20289832 + Chy4G080790.1 Chy04g01361 225260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01361 392 ProSiteProfiles Protein kinase domain profile. 99 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01361 392 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 59 389 - -
Chy04g01361 392 Pfam Protein kinase domain 101 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01361 392 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Chy04g01361 392 SUPERFAMILY Protein kinase-like (PK-like) 78 385 IPR011009 -
Chy04g01361 392 Gene3D Phosphorylase Kinase; domain 1 65 177 - -
Chy04g01361 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Chy04g01361 392 CDD STKc_IRAK 105 380 - -
Chy04g01361 392 Gene3D Transferase(Phosphotransferase) domain 1 178 391 - -
Chy04g01361 392 PANTHER OS01G0750732 PROTEIN 59 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01361 Chy-Chr4:20276931 Chy12g00836 Chy-Chr12:13639375 2.31E-93 dispersed
Chy04g01361 Chy-Chr4:20276931 Chy04g02100 Chy-Chr4:26381217 2.89E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71205 PF00069 Pkinase 6.30E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01361 - - csv:101223038 647.506