Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01362 ATGGGCGCGCTTTTGGTGGTTTCGCTGCTATTTTTGGATTTCTTCTACTTGGCAGCTTCTTCTACTGACTCCCGTGATTCTTCAGTTCTTCAATCCTTGAAAGACGGATGGCAAAATACACCACCAAGCTGGGGAACATCAAATGATCCATGTGGAACTCCCTGGGATGGAGTGATTTGCAAAAACTCTAGAGTAGTTGCATTGAAATTATCAAGTATGGGCCTAAAAGGTAAACTTGGTGGAGACATTGGAGGCCTTACTGAACTGAGATCACTGGACCTTGCAGCCAACCGAGACCTTGTTGGTTCGATCTCTCCGGCTCTAGGGAACTTGTTGAAATTAGATACCTTGATCCTTTCTACGTGTGGATTTAATGGCAAAATTCCAGAAGAATTGGGCAATCTTTCTGAGCTAACCTTCTTGTCTTTATATTCTAACAATTTCACCGGTACCATACCGGCAACTCTGGGAAAACTCTCCAAACTATACTGGCTAGACCTGGCAGATAATCAGTTAACTGGTGCTCTCCCAGTTTCCACTTCTGGATCCTCGGGTTTAGATAAACTTTATATGGCTAAACATTTTCATTTCAGCAATAACCAGTTATCAGGTACCATTCCACCTGAAATTTTTAGCTCTGAGATGGTATTAATACACATATTATTTGATGGAAACAATTTTTCTGGGAGTATCCCATCAACATTGGGACTTGTTAAGACCCTCGAGGTTCTTCGAGTTGATCGGAATTCTTTGGCGGGAAATATCCCATCAACTCTAAACAACCTAATAAATGTGAATGAATTGCATTTAGCCAACAATATGCTCACAGGTCCACTACCAAACTTATCTCAAATGAGTTCACTAAATTACGTGGATCTTAGTAACAACTCATTTAGCTCATCAGTAGCTCCAGGATGGTTCTCAACTCTACGATCTCTCACCACTCTAATTGTTGAATACGGATTAATACGGGGAAATCTGCCAGAAGGAATCTTTAGCTTACCACAGATACAACAAGTAAAACTGAAGAATAATGCATTTAGTGGGACATTGAATATGGGCGACAGCATCAGCCAAGGGTTGCAGCTAGTCGAGTTGCAAAATAACAACATTTCCTCAGTTACCTCTTTTTCGGGTTATACTAACGCTTTGATGCTGACAGGAAATCCTGTGTGTGACGCTGATATCCTCTCAAATACAAACTATTGCCAACTTCAACAGCAACAAGCAAAAACCTATATTACCAGTCTTGTCTACTGTGGCCGTAATTCATGTCCTCCTGATGAGAAGCTGAACCCACGAAGTTGTGAATGTGCCTATCCATATGAAGGGACTTTATACTTTAGAGGACCCTCTTTCCGGGAATTGTCCAATATAACTCTGTTTCATTTATTGGAAATGAGCCTTTTGGAAAAATTCAATCGAACACCTTTTGTTCAAAACCCTTTCTTTAATGCTGTTGATTATCTTCAGATGGAGCTTGCACTTTTTCCAGCCGATGGTAAATATTTCAAAAGGGAAGACATTCAGAGGATTGGTTTTGATTTGCACAGTCAAAATTACAAACCCCCCGACAAATTTGGGCCATATTACTTCTTTGCGTCTCCTTATCCTTTTTCAGACATTGATAATGGATCAACTTCAACCAACACCGGAATGGTAATTGGAATAGCTGTTGGCTGTGCCTTTCTTGTTCTTTGCCTCATTGGACTTGGAACATATGCAATTCAACAAAAGAGACGTGCAGAAAAGGCCAATTCAAATGCTTTGTGGGTGCCAAGTGGAAATGATAGTGGAAGCGCGCCACAATTAAAGGGTGCCAGATGGTTTTCTTATGTTGAACTTAAAAAATGCACAGATAATTTCTCCACCAGTAATGTGGTAGGATCAGGAGGATTTGGCATGGTATACAGAGGAACACTGGTGGATGGAAAAGTAGTTGCAATCAAAAGAGCCCAACAAGGTTCAATGCAGGGTGGCCTTGAGTTCAAGACGGAAATTGAGCTGCTTTCACGAGTTCATCACAAAAATCTTCTAGGCCTAGTGGGATTTTGTTCCGAACAAGGAGAACAAATTCTTGTTTATGAATTCATGCCTAATGGAACACTTAGACAAAGCTTAGCTGTTCGTGAGGTGCGTACATCGATGAATAAGTACGATGAAGAATATTATGGTTTGAAGCATATACTGGATCCAACCATATTTGATAATACGACAAATCTTATTGGGTTCGGAAAGTTCTTAGAGTTGGCCCTGCAATGTGTCGAAGAAGCAGCTGCAAATCGTCCCACAATGAGTGAAGTGGTTAAGACAATTGAGAATATTTTGCAGAATGATGGAATAAATACAAGTTCAACATCAGCATGCTCATCTGCCACAGACTTTGTGACTTCCAAAACTTCTTCTAGACATCCCTATAATGATGCTTCGCAGAAAGAGAGTGTCAACAGGAATAGCCAATGA 2463 40.64 MGALLVVSLLFLDFFYLAASSTDSRDSSVLQSLKDGWQNTPPSWGTSNDPCGTPWDGVICKNSRVVALKLSSMGLKGKLGGDIGGLTELRSLDLAANRDLVGSISPALGNLLKLDTLILSTCGFNGKIPEELGNLSELTFLSLYSNNFTGTIPATLGKLSKLYWLDLADNQLTGALPVSTSGSSGLDKLYMAKHFHFSNNQLSGTIPPEIFSSEMVLIHILFDGNNFSGSIPSTLGLVKTLEVLRVDRNSLAGNIPSTLNNLINVNELHLANNMLTGPLPNLSQMSSLNYVDLSNNSFSSSVAPGWFSTLRSLTTLIVEYGLIRGNLPEGIFSLPQIQQVKLKNNAFSGTLNMGDSISQGLQLVELQNNNISSVTSFSGYTNALMLTGNPVCDADILSNTNYCQLQQQQAKTYITSLVYCGRNSCPPDEKLNPRSCECAYPYEGTLYFRGPSFRELSNITLFHLLEMSLLEKFNRTPFVQNPFFNAVDYLQMELALFPADGKYFKREDIQRIGFDLHSQNYKPPDKFGPYYFFASPYPFSDIDNGSTSTNTGMVIGIAVGCAFLVLCLIGLGTYAIQQKRRAEKANSNALWVPSGNDSGSAPQLKGARWFSYVELKKCTDNFSTSNVVGSGGFGMVYRGTLVDGKVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRQSLAVREVRTSMNKYDEEYYGLKHILDPTIFDNTTNLIGFGKFLELALQCVEEAAANRPTMSEVVKTIENILQNDGINTSSTSACSSATDFVTSKTSSRHPYNDASQKESVNRNSQ* 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20290431 20297151 - Chy4G080800.1 Chy04g01362 225261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01362 820 Pfam Protein tyrosine and serine/threonine kinase 625 711 IPR001245 GO:0004672|GO:0006468
Chy04g01362 820 Gene3D Phosphorylase Kinase; domain 1 595 697 - -
Chy04g01362 820 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Chy04g01362 820 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Chy04g01362 820 PANTHER LRR RECEPTOR-LIKE KINASE 5 708 - -
Chy04g01362 820 PANTHER LRR RECEPTOR-LIKE KINASE 709 805 - -
Chy04g01362 820 Gene3D Ribonuclease Inhibitor 281 422 IPR032675 -
Chy04g01362 820 SUPERFAMILY L domain-like 36 299 - -
Chy04g01362 820 MobiDBLite consensus disorder prediction 798 820 - -
Chy04g01362 820 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 708 - -
Chy04g01362 820 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 709 805 - -
Chy04g01362 820 Gene3D Ribonuclease Inhibitor 182 280 IPR032675 -
Chy04g01362 820 SUPERFAMILY Protein kinase-like (PK-like) 597 712 IPR011009 -
Chy04g01362 820 ProSiteProfiles Protein kinase domain profile. 622 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01362 820 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Chy04g01362 820 SUPERFAMILY L domain-like 282 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01362 Chy-Chr4:20290431 Chy08g00556 Chy-Chr8:13120571 7.10E-97 dispersed
Chy04g01362 Chy-Chr4:20290431 Chy04g02327 Chy-Chr4:27652424 5.22E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71206 PF07714 PK_Tyr_Ser-Thr 4.70E-14 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01362 - - csv:101207906 1324.3