Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01388 ATGGAGTTCGTAGGCGAGAAGAGGGATTTTGATTCTGGAAACGACAACAACAAGCCCAACTCTGCTCAACCACTTCTTGATTCTTCTTTTCAACCCTCACTCGTTGATGATACCAATGCCAAAGAAGCTGAAGAATTAAGTGAACGCATAGCTCGAGACCTCAAGGATGGCCTTCATCCTCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAGAAAGATTGTGGACTTTAGCTCGGTCGAAGGTTTTTGGATAAGCTATTGTCATTTGGCTCGTCCGGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATTCGTCCACTTTGGGAGGATTCTGCCAACTGTAATGGTGGGAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGATCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGACCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCACATGGGTATGTAATGGAATACAAACCTCACGATGCATCTCTGCGTGATAACTCGTCATACAGAAACACTTGGTTGCGAGGATGA 717 44.63 MEFVGEKRDFDSGNDNNKPNSAQPLLDSSFQPSLVDDTNAKEAEELSERIARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIRKIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG* 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20485942 20498293 + Chy4G081060.1 Chy04g01388 225287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01388 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 231 IPR023398 -
Chy04g01388 238 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723|GO:0003743|GO:0006413
Chy04g01388 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Chy04g01388 238 SUPERFAMILY eIF4e-like 50 234 IPR023398 -
Chy04g01388 238 MobiDBLite consensus disorder prediction 1 38 - -
Chy04g01388 238 MobiDBLite consensus disorder prediction 15 36 - -
Chy04g01388 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 238 IPR001040 GO:0003723|GO:0003743|GO:0006413
Chy04g01388 238 PANTHER BNAA10G16710D PROTEIN 39 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01388 Chy-Chr4:20485942 Chy12g00020 Chy-Chr12:245413 9.66E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01388 K03259 - csv:101204290 491.886