Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01423 ATGGAACCACTTGTTGATGGTATGAGTTCTTTACTGAAAACTCAGAACCCGGCATCTACATCAAGGAATCTCGATTCATCTCGCCAGCCATCTCCTAAACAATCTAGGAATGAAGCAACTTCGTCAACGTCCTATGCTATGTCTCAAAATTGTGCCAAGAAACCTCTTCGCCATCCAAATGGTTCTTCTGTAAGTAGTAAAAAACATCCTACCAATTTGAACGTGCAGAATGAAGGTTTAACTGATGTGACAAAACATACATATGTTTCCAATAAGGGGAAATCCGAGCTCGTAAACCCGACGGATAGTTCATATAAATCAACTGAAAGTTCTTTTCAGAAGAAGGTTTCTTCGGAGGGAGGTGGAGCAGAACCTCTTGTGAAGCATATTATTGATGATTCTAAGGATTGTTGCTCAAGTGGCTCAGATGAATCTGGAAATCAAGTATTGAACGCATCGAAAGGAGCTTCCACACAAATAATTGATCAGCGAAAATCTCAACCAGCTGAAATATCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGCGAATGTGCAAGTAGCATTGAAAAGTCTAGCGAAAGCGTTGACATCACAAATTCTCTTGATCTTGACAAGAGTAGGAAAACAAGTGTTTACCGAGGGAGCACCGGCAGTGATATCAGTGATGAAAGCAACTCAAGTAGTTTAAGCAATGCCATGTATAAGCCTCATAAGGCAAACGATACAAGATGGGAAGCAATGCAAGTTGTGAGATCTCATGATGGGATGTTAGGACTTAACCATTTCCGATTGCTACGAAGACTGGGATGTGGCGACATTGGCAGTGTCTATCTTTCAGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACCGAACGCGAGATATTGCAATCTCTGGATCATCCTTTCCTGCCAACTTTGTATACACACTTTGAGACAGAAAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCTGGGGGCGACTTGCATGCTCTTAGGCAGAGACAGCCCGGCAAATTTTTTCCAGAACATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATTTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGACGATGGGCACATAATGCTCTCTGATTTTGACCTGTCTCTTAGATGCGCCGTCTCCCCAACACTTGTTAAATCATCGAACTCGGGTTTAGAAGCTAAAAGCTCAGGGTACTGTGTTCAGCCTGCTTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACACCTCGCTTCCTAAGCAGACACAGGAAAGAAAAGAAATCCAAACCAAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCCGAGCCCACAAGTGCAAGATCAATGTCATTCGTTGGTACACACGAGTACCTAGCACCTGAAATCATAAAAGGTGAAGGCCATGGAAGTGCCGTCGATTGGTGGACTTTCGGGATCTTTCTTTACGAACTTTTGTTCGGTAGAACCCCATTCAAGGGGGCTGGGAACCGTGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCCGAGTCTCCTTCTGTTAGCTTTGCAGCAAGAGACTTAATTCGAGGTTTGCTTGTAAAAGAACCACAGCATCGTCTCGCTTATAGGCGTGGCGCTACCGAGATCAAGCAACATCCATTCTTCCAAAGTGTGAATTGGGCACTTATCCGCTGTGCCAATCCTCCTGAAGTGCCAAGAGTAGATGTCATTGATTTCTCTTCAAGAATGGAGACACCACACACACCGGCAGGCGAAAAGATGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA 2016 43.85 MEPLVDGMSSLLKTQNPASTSRNLDSSRQPSPKQSRNEATSSTSYAMSQNCAKKPLRHPNGSSVSSKKHPTNLNVQNEGLTDVTKHTYVSNKGKSELVNPTDSSYKSTESSFQKKVSSEGGGAEPLVKHIIDDSKDCCSSGSDESGNQVLNASKGASTQIIDQRKSQPAEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIEKSSESVDITNSLDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCVQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDVIDFSSRMETPHTPAGEKMPGVDVKPSGNYLEIDFF* 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20858972 20861523 - Chy4G081410.1 Chy04g01423 225322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01423 671 MobiDBLite consensus disorder prediction 1 110 - -
Chy04g01423 671 Gene3D Phosphorylase Kinase; domain 1 277 362 - -
Chy04g01423 671 Gene3D Transferase(Phosphotransferase) domain 1 510 633 - -
Chy04g01423 671 CDD STKc_phototropin_like 278 638 - -
Chy04g01423 671 SMART serkin_6 279 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01423 671 SUPERFAMILY Protein kinase-like (PK-like) 254 642 IPR011009 -
Chy04g01423 671 MobiDBLite consensus disorder prediction 9 110 - -
Chy04g01423 671 ProSiteProfiles Protein kinase domain profile. 279 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01423 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Chy04g01423 671 MobiDBLite consensus disorder prediction 227 250 - -
Chy04g01423 671 MobiDBLite consensus disorder prediction 155 175 - -
Chy04g01423 671 Pfam Protein kinase domain 280 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01423 671 Pfam Protein kinase domain 512 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01423 671 PANTHER FLIPPASE KINASE 1-RELATED 14 671 - -
Chy04g01423 671 Gene3D Transferase(Phosphotransferase) domain 1 363 430 - -
Chy04g01423 671 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 14 671 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01423 Chy-Chr4:20858972 Chy12g00620 Chy-Chr12:8912134 0 dispersed
Chy11g00746 Chy-Chr11:10264225 Chy04g01423 Chy-Chr4:20858972 1.79E-114 dispersed
Chy04g01423 Chy-Chr4:20858972 Chy08g00920 Chy-Chr8:16632692 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71209 PF00069 Pkinase 8.60E-36 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01423 K08286 - csv:101219962 1305.81