Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01441 ATGGCATCCATTTTCACCCATTCCTCAACCCAATTTCCATTCCATGGAGTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTCTGTTTCTCTCTCAGATCCCCGAATATCCCAATCCGGAAGTATCTGTGGAACCCTCAAGCCTCCACCTTCATCCAGATTCATCCCAACCTTCATCGAAGAAATGGAAGCCATATCCGAGCTTCTCACAACTCGCTCTTGGACAACTCACTTCGTCAATTCCACTCCACCGATGTTCGCTCTATCTCAATGCTTCAACGATCTCTCTCACACCGATTGCCTTCTCTGCTACGCTGCCAGCCGTACCTCCCTTCCCCGTTGTCTCCCCGCCATCTCTGCTCGGATCTTCCTTGATGGTTGCTTCCTCCGGTATGATAATTACAGCTTCTATAAAGAATCCACTGATTCGGTTAGGGATTCGGTGAATTGCACCTCGGAATTGGGTGGAATCGATGAATCTGAGAGGTTAGTGTTCGGGGAGAATGTTAGGGTTGTTGTTGAGACTGTGACGACGACGGCCATGGAGAAGGGTGGATTTGGGATGGGGGAAGTTAATGGGATGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAACCTGAGGGATGCAGGGCTTGCTTGGAGAAGGCGAAGAGGAGTATTGGGAGTTGTTTGCCGAGTAAAGAAGGAAGGGCTATGAATGCTGGGTGTTATTTGAGATATTCAACTGTGAAATTCTATAATGATAAGTATGAAGATCGGAATCATGATGGATTTTCTGGACGAAGAGCTGTAGTTACCATTGCCTTAGCTTCAGCTGCCTCCTTGATCATCTTCTTTTCAGCTGTGTTTGCATGTTATACAAGAATTTCAAAGTTCAAGAAAGAAAAGAAAAGGCAATCCCTCATTCCAGTTTCGCTTAAGGATTCCGATTTGAACTTCAAGTATGAAACGCTTGAAAAGGCAACTAATTACTTCAACCTATCAAATAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGGACTCTTCCAAATGGGCAGATTGTTGCTGTGAAGAGATTGGTTTTCCATACAAGACAATGGGTTGATGAGTTCTTCAATGAGGTAAATTTGATCCGCGGAATCCAACACAAAAGCCTTGTTACTCTTTTGGGTTGCAGCATTGAAGGGCCTGAAAGTCTGCTCGTCTACGAGTATGTTCCGAACGGGAGCCTTGATCATTTCATTTTCGATAAGAACAAGGCTCAGATTCTAACCTGGAAGCAGCGTTTCAATATTATAATGGGAACAGCTGAGGGGCTTGCACATCTTCATGAAGGTTGTAAAATAAGAATAATCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAAAATTTCAACCCAAAGATTGCGGATTTTGGCCTCGCTCGGCATTTTGCAGCCGATCAGTCTCATCTTAGCACAGGAATTGCCGGAACACTAGGTTACATGGCTCCTGAATATCTTGTTCGAGGACAACTTACAGAAAAAGCAGATGTTTATAGTTTCGGGGTGTTGATACTCGAGATCGTCTGCGGTAGAAGAAACAGTTCCTTCACTGAGAACTCCACCCCACTGCTCCAAACAGTTTGGGATCTGTACAAAACAGAGAGATTAACCGAAGCCATTGACACAAGCCTGAACAAGGATTACCCTGCAAAAGAAGCCATGGATGTTCTACAAATAGGACTTTTATGCACACAAGCTCTAGCTTCTTTGAGACCGTCAATGGCGATGATAGTGAAACTGTTAACAAGTGATGTAGAACGGAAGGTTGGCATCCCAGAACAACCTCCATTTCTTAATCCTTGTGGAACTTCAAGAAGATCTTGCAGAATTAGCAGCTTGGTACCTCATGCAATTTCCAAACTTGAAGTTTCTTCTTGCACATCAACAGATTCAGGTTTCTCTTCTAACTTGCCTTCAAGAAGTGGAGATTTTGCTGAACTGAATTCAAATGAACTTTGA 2013 43.82 MASIFTHSSTQFPFHGVPFFFFFFFFFFFFLFFSVSLSDPRISQSGSICGTLKPPPSSRFIPTFIEEMEAISELLTTRSWTTHFVNSTPPMFALSQCFNDLSHTDCLLCYAASRTSLPRCLPAISARIFLDGCFLRYDNYSFYKESTDSVRDSVNCTSELGGIDESERLVFGENVRVVVETVTTTAMEKGGFGMGEVNGMFGLAQCWGSVEPEGCRACLEKAKRSIGSCLPSKEGRAMNAGCYLRYSTVKFYNDKYEDRNHDGFSGRRAVVTIALASAASLIIFFSAVFACYTRISKFKKEKKRQSLIPVSLKDSDLNFKYETLEKATNYFNLSNKIGQGGAGSVYKGTLPNGQIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKSLVTLLGCSIEGPESLLVYEYVPNGSLDHFIFDKNKAQILTWKQRFNIIMGTAEGLAHLHEGCKIRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQSHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKTERLTEAIDTSLNKDYPAKEAMDVLQIGLLCTQALASLRPSMAMIVKLLTSDVERKVGIPEQPPFLNPCGTSRRSCRISSLVPHAISKLEVSSCTSTDSGFSSNLPSRSGDFAELNSNEL* 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21039699 21042755 - Chy4G081590.1 Chy04g01441 225340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01441 670 CDD STKc_IRAK 337 600 - -
Chy04g01441 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Chy04g01441 670 Gene3D Transferase(Phosphotransferase) domain 1 407 608 - -
Chy04g01441 670 ProSiteProfiles Gnk2-homologous domain profile. 42 142 IPR002902 -
Chy04g01441 670 Pfam Protein kinase domain 332 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01441 670 Gene3D - 48 142 IPR038408 -
Chy04g01441 670 Gene3D - 166 251 IPR038408 -
Chy04g01441 670 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 653 - -
Chy04g01441 670 SMART serkin_6 331 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01441 670 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 29 653 - -
Chy04g01441 670 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Chy04g01441 670 Pfam Salt stress response/antifungal 168 248 IPR002902 -
Chy04g01441 670 Pfam Salt stress response/antifungal 83 140 IPR002902 -
Chy04g01441 670 ProSiteProfiles Protein kinase domain profile. 331 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01441 670 ProSiteProfiles Gnk2-homologous domain profile. 151 251 IPR002902 -
Chy04g01441 670 Gene3D Phosphorylase Kinase; domain 1 291 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01718 Chy-Chr3:18702296 Chy04g01441 Chy-Chr4:21039699 8.10E-168 dispersed
Chy03g01719 Chy-Chr3:18705923 Chy04g01441 Chy-Chr4:21039699 2.35E-159 dispersed
Chy04g01441 Chy-Chr4:21039699 Chy02g00370 Chy-Chr2:2359828 2.95E-98 dispersed
Chy02g01702 Chy-Chr2:17265048 Chy04g01441 Chy-Chr4:21039699 2.71E-18 transposed
Chy06g01129 Chy-Chr6:9758759 Chy04g01441 Chy-Chr4:21039699 3.39E-78 transposed
Chy10g00886 Chy-Chr10:14646950 Chy04g01441 Chy-Chr4:21039699 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71211 PF00069 Pkinase 1.30E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01441 - - csv:101218775 1212.98