Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01449 ATGGAGCCAACGGAGGATATTCTTTTACCGGGAAGAGATAATTTTGCTCTCCCTCTAACCCTCTCTCTCGTTTCTTATCCGGCGACGGTCGCAGCACCCACGAACAGCAGTGTCCGACGATTTCCGACGCTAATCCATCTCCTTATCTATCACCGGGGGGCAGCTTGTTTCGGCCCTAGCCGGCGTGATTCATCACACGGCGGCACTAGCCTCTTAAGGGGAAGGAGAATACGTGTGCAAGGGAAGATTATGGCATTAACAGCCCCAGGACAGCTCAATGTTAATGAATCTCCTTCATGGGGATCTAGAAGTGTCGATTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTATATGGCCAGAGAATTAAAAACAGGTGAAATTGTTGCACTGAAGAAAATACGAATGGATAATGAGAGGGAAGGGTTCCCTATTACTGCGATACGAGAAATCAAAATTTTAAAGAAGCTCCATCATGAAAATGTAATCAAGTTGAAAGAGATTGTAACATCTCCAGGTCCTGAGCAGGATGAACAAGGGAAGCCAGATGGTAACAAGTATAAAGGGGGCATCTACATGGTTTTCGAGTACATGGACCATGATTTGACAGGTCTTGCAGATCGTCCAGGAATGAGGTTTTCAGTTCCCCAAATCAAGTGCTACATGAGGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTGCTGCATAGGGATATAAAAGGCTCAAATCTGTTAATTGACAACGATGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCAGGTCGTTTTCTAATGATCACAATGCAAATCTAACAAATCGTGTGATTACCTTATGGTACAGACCGCCTGAATTGCTGCTTGGGTCAACAAAATATGGTCCAGCAGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTTCATGGGAAGCCGATATTCCCTGGCAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTATGTGGTGCCCCAGATGAGGTCAATTGGCCTGGGGTTTCGAAAATCCCTTGGTACAACAATTTCAAACCCACAAGGCCTATGAAGAGACGTCTCAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAACTGTTGGAAAAGATGCTCACTCTTGATCCTTCTCAGAGGATTGCTGCCAAGGATGCCCTTGATGCAGAGTATTTTTGGACTGACCCATTACCTTGTGACCCTAAGAGTTTACCCAAGTATGAAGCATCACACGAGTTCCAGACTAAGAAGAAGCGCCAGCAACAACGACAGCATGAAGAAACTGCGAAGCGACAGAAGTTGCAACATGCACAGCATGGACGTCTTCCGCCTATTCAGCAGTCAGGGCAAGCTCATGCACAGATGCGACCGGTAGCTAACCAGCCTATTCATGGGTCTCAACCTCCAATTGCTGCAGGGCCTAGCCATCATTTTGGGGGGAAGCCTCGTGGACCCCCAGGTCCTGGAAGGTATCCCTCAGGTGGAAATCCTCCTGGATACAACCACCCAAGTCGTGGTAGTCAAGGTGGGGGTGGTTATGGCAACACACAATATGCTCAAGGACGAGGTGCACCTTATGGATCTGGTAACATGTCCAGTGCTGGTCCTCGAGGTGGAGCTGGAGGTGGTGGTTATGGTGTGGGAGCTTCAAGTTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGTCGTGGCTCCAATGTGATGGGTGGAAACCGAAACCAACAATATGGGTGGCAACAGTGA 1797 47.19 MEPTEDILLPGRDNFALPLTLSLVSYPATVAAPTNSSVRRFPTLIHLLIYHRGAACFGPSRRDSSHGGTSLLRGRRIRVQGKIMALTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEQDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNDGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRIAAKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQHEETAKRQKLQHAQHGRLPPIQQSGQAHAQMRPVANQPIHGSQPPIAAGPSHHFGGKPRGPPGPGRYPSGGNPPGYNHPSRGSQGGGGYGNTQYAQGRGAPYGSGNMSSAGPRGGAGGGGYGVGASSYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ* 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21132250 21140872 - Chy4G081670.1 Chy04g01449 225348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01449 598 Gene3D Transferase(Phosphotransferase) domain 1 205 447 - -
Chy04g01449 598 MobiDBLite consensus disorder prediction 515 542 - -
Chy04g01449 598 PANTHER CYCLIN-DEPENDENT KINASE C-2 88 536 - -
Chy04g01449 598 PANTHER CELL DIVISION PROTEIN KINASE 88 536 - -
Chy04g01449 598 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Chy04g01449 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Chy04g01449 598 CDD STKc_CDK9_like 108 407 - -
Chy04g01449 598 MobiDBLite consensus disorder prediction 420 449 - -
Chy04g01449 598 ProSiteProfiles Protein kinase domain profile. 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01449 598 MobiDBLite consensus disorder prediction 569 598 - -
Chy04g01449 598 MobiDBLite consensus disorder prediction 456 470 - -
Chy04g01449 598 Gene3D Phosphorylase Kinase; domain 1 95 204 - -
Chy04g01449 598 SUPERFAMILY Protein kinase-like (PK-like) 102 415 IPR011009 -
Chy04g01449 598 SMART serkin_6 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01449 598 Pfam Protein kinase domain 108 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01449 598 MobiDBLite consensus disorder prediction 418 598 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01669 Chy-Chr3:18451766 Chy04g01449 Chy-Chr4:21132250 1.15E-94 dispersed
Chy04g01449 Chy-Chr4:21132250 Chy05g00037 Chy-Chr5:253177 0 dispersed
Chy10g00800 Chy-Chr10:14033232 Chy04g01449 Chy-Chr4:21132250 3.09E-94 dispersed
Chy10g01254 Chy-Chr10:17096948 Chy04g01449 Chy-Chr4:21132250 1.32E-86 dispersed
Chy04g01449 Chy-Chr4:21132250 Chy12g01147 Chy-Chr12:16403329 1.38E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71213 PF00069 Pkinase 1.70E-74 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01449 K08819 - csv:101215918 996.497