Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01464 ATGAAAGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGTTTAGATGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGGAGGGAAGATGAGGAAGGTGTCGGCATCGGGGCCGGCGGCGGCGGCGGCGGTGGTGGAGGAGGTGTTGGCGGTGGAAGACCCGCAATCACTAGACAGGAGTGGGAGATTGACCCTTCCAAACTAATCATCAAAGCTGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAGTTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGAGAAGAGGGTCATAGGTCAGAGGCAGAAATTGCGTCCCTTAGAGCGGCTTTTACGCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTCATAGGAGCAACAATAGGCTCCTCAGATCTACACATACAAACAGAAAATGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGAAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCTTTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAAGCGTCAAATCCCAATGATATGACTGGTGAGACTGGAACACTTGGGTATATGGCTCCGGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTCGGCATCTGTTTATGGGAGATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCAGAAGTTACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCCAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATCGATACATCGAAGGGCGGAGGTATGATCCCCCTCGATCAGTCGCAAGGCTGTTTTTGCTTCCGTAGGTACCGGGGGCCTTGA 1158 47.15 MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKRREDEEGVGIGAGGGGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP* 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21251658 21254999 + Chy4G081820.1 Chy04g01464 225363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01464 385 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 379 - -
Chy04g01464 385 MobiDBLite consensus disorder prediction 33 69 - -
Chy04g01464 385 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01464 385 Gene3D Phosphorylase Kinase; domain 1 69 166 - -
Chy04g01464 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Chy04g01464 385 PRINTS Tyrosine kinase catalytic domain signature 327 349 IPR001245 GO:0004672|GO:0006468
Chy04g01464 385 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Chy04g01464 385 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672|GO:0006468
Chy04g01464 385 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672|GO:0006468
Chy04g01464 385 CDD STKc_MAP3K-like 88 356 - -
Chy04g01464 385 Pfam Protein tyrosine and serine/threonine kinase 84 356 IPR001245 GO:0004672|GO:0006468
Chy04g01464 385 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 379 - -
Chy04g01464 385 Gene3D Transferase(Phosphotransferase) domain 1 182 372 - -
Chy04g01464 385 MobiDBLite consensus disorder prediction 33 48 - -
Chy04g01464 385 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g01464 385 SUPERFAMILY Protein kinase-like (PK-like) 68 356 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01464 Chy-Chr4:21251658 Chy06g00556 Chy-Chr6:3814007 8.24E-175 dispersed
Chy12g01272 Chy-Chr12:17302183 Chy04g01464 Chy-Chr4:21251658 1.98E-68 wgd
Chy02g02571 Chy-Chr2:28921622 Chy04g01464 Chy-Chr4:21251658 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71214 PF07714 PK_Tyr_Ser-Thr 2.70E-64 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01464 - - csv:101212631 757.288