Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g01471 | ATGGATAGAATCATCCAGTCGCCGGCGTCCAAGTTCCGCCCCTTTCGGCGACAGCTAATCGGCTCGTCCTCCGATTCGGCCACCGGCAAGGCGGCCGCTACGGACGAACACCCAAATTACATCCTCCTCCGCTACCAAATCCTCGACCCTGATAGCGACATTGTAGCACAATGGAACCGCGTGTTCCTAGTGACATGCCTGATCGCTCTGTTCATCGATCCGCTGTATTTCTACACGTCGTCTGTGGGAGGGCCGGCATGCCTGACCTCGGAGGTGAATCTGGGAGTGGCGATCACGTTCTTCAGAACGGTAACCGATCTGTTCTTCTTGTTGCACATGGTGTTGAAGTTTCGAACGGCGTATGTTGCTCCAAGCTCTAGGGTTTTTGGAAGAGGAGAGCTGGTTATGGATGCCAAAGCCATTGCTACGCGCTATTTGAAGTCTGATTTTGTGATTGATCTTGCCGCTACTCTCCCCCTCCCACAAATAGTGATGTGGTTAGTGATTCCAATAACAAGAAACTCAAGAGTGGATCATGCCAACAACACAATTGCTCTTCTTGTTCTTCTTCAATACGTCCCACGGTTGTTCCTCATCTTCCCTCTCAACCAACGCATCATCAAAACTACTGGTGTTGTTGCCAAAACTGCGTGGGCTGGTGCTGCCTACAATCTCATCCTCTACATGCTTGCCAGTCATGTTTTGGGATCTACATGGTATTTGTTGTCCATAGGGAGACAGTTTTCATGTTGGAAATCAGAATGTGCAAAGGAAAATGCCTCCCAAGTTCTAACATGCCTTCCCATCTTCTTGGATTGTACCAGTTTGAATGACACTTTAAGACAATATTGGCTTAATGTCACTCAAGTTACTTCCAAATGTGATCCAAGGAATGAAAACATTAAGTTCAAGTTTGGAATGTTCTCAGATGCTTTCACCAATGATGTTGCCTCCTCTCATTTCTTTGCAAAGTACTTTTATTGTCTTTGGTGGGGCCTTAGAAATTTAAGGTATTATTCCCATCAATGGAGAACATGGGGTGCTTGTTTAATTCAAGTAGCTTGGAGGAGGCTTCAGAAGAGAAAATTGGCAAAGAGATCAACGGCATACAGAGACAGCTTGAGTTCCTATGCAGATTCAATGCAACAATATAACGAATACGATATCGAGCTAGCAGAAGAAAATTACGATGATGACAGCGACAACACCATTGAAGACGAAGACGATATGTCTTCTGCAGACTACAAATCACAGCATCTAGGGGCAACAATTTTGGCTTCAAAGTTTGCTGCCAATACTAGAAGAGGAGTTAATCAAAAGGGTCAAACATCCAAACCTTCAAGTTTGAAAATGCCAAAGTTGTTTAAACCAGATGAACCTGATTTTTCTATGGATGGATGA | 1401 | 44.83 | MDRIIQSPASKFRPFRRQLIGSSSDSATGKAAATDEHPNYILLRYQILDPDSDIVAQWNRVFLVTCLIALFIDPLYFYTSSVGGPACLTSEVNLGVAITFFRTVTDLFFLLHMVLKFRTAYVAPSSRVFGRGELVMDAKAIATRYLKSDFVIDLAATLPLPQIVMWLVIPITRNSRVDHANNTIALLVLLQYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLILYMLASHVLGSTWYLLSIGRQFSCWKSECAKENASQVLTCLPIFLDCTSLNDTLRQYWLNVTQVTSKCDPRNENIKFKFGMFSDAFTNDVASSHFFAKYFYCLWWGLRNLRYYSHQWRTWGACLIQVAWRRLQKRKLAKRSTAYRDSLSSYADSMQQYNEYDIELAEENYDDDSDNTIEDEDDMSSADYKSQHLGATILASKFAANTRRGVNQKGQTSKPSSLKMPKLFKPDEPDFSMDG* | 467 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 21377399 | 21381031 | - | Chy4G081890.1 | Chy04g01471 | 225370 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g01471 | 466 | Pfam | Ion transport protein | 58 | 336 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Chy04g01471 | 466 | MobiDBLite | consensus disorder prediction | 433 | 449 | - | - | |
Chy04g01471 | 466 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 36 | 336 | - | - | |
Chy04g01471 | 466 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 336 | 464 | - | - | |
Chy04g01471 | 466 | SUPERFAMILY | Voltage-gated potassium channels | 49 | 334 | - | - | |
Chy04g01471 | 466 | MobiDBLite | consensus disorder prediction | 433 | 466 | - | - | |
Chy04g01471 | 466 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 | 36 | 336 | - | - | |
Chy04g01471 | 466 | MobiDBLite | consensus disorder prediction | 452 | 466 | - | - | |
Chy04g01471 | 466 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 | 336 | 464 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01471 | Chy-Chr4:21377399 | Chy05g00992 | Chy-Chr5:14586237 | 3.44E-104 | dispersed | |
Chy02g02176 | Chy-Chr2:25975510 | Chy04g01471 | Chy-Chr4:21377399 | 5.35E-125 | transposed | |
Chy04g00288 | Chy-Chr4:2602983 | Chy04g01471 | Chy-Chr4:21377399 | 1.80E-127 | transposed | |
Chy02g02569 | Chy-Chr2:28909271 | Chy04g01471 | Chy-Chr4:21377399 | 1.32E-180 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g01471 | K05391 | - | csv:101216651 | 680.248 |