Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01475 ATGGATCTGGAGAGTGCTATTGGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACTTTAGCTTATCAGAGCTTGGGGGTTGTTTATGGAGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGTACTTTTGCTGAGGATATTAAACACTCTGAAACCAACGAAGAGATTTATGGAGTTCTTTCTTTTGTCTTCTGGACTCTCACGCTCATTCCTTTGATTAAGTATGTATTCATTGTGCTTCGAGCTGATGATAATGGCGAAGGAGGAACTTTCGCTTTATACTCATTGCTCTGTCGCCATGCTCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGACGAGGACCTTTCGGAATATACAAAAGATGGGGTGGATTTAACCAACAAGAAGACTTGTGGGTCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGCTCCAGAGGGTTTTGCTTGTTCTAGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTTCAATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAACTTTCCATGGCTAAACCACACCATCGCTATGTTGAAGTCCCAGTTGCTTGTGCCATATTGGTTATCCTGTTTGCAATTCAACATTATGGAACCCATCGAGTCGGGTTTCTATTTGCACCAGTTGTAATTACATGGCTTCTGTGTATCAGTGCCATAGGGCTGTACAATATCTTCTACTGGAATCCTCATGTTTACCGAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTCGGCGGGATCCTGCTATGTATGACAGGTTCAGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCCATCAAGATTGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCGTACATGGGACAAGCTGCTTATCTCTCTCAACATCACGGGGACAGTAACTACCAAATTGGATTTTACGTGTCTGTTCCTGAGAAGTTAAGATTGCCTGTTCTTGTGATCGCCATTTTAGCCGCAGTGGTAGGAAGTCAAGCTGTCATTACTGGCACTTTTTCGATAATAAAACAGTGCTCCTCATTGGGTTGCTTCCCGAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCATGGTCAGATTTATATACCAGAGATCAATTGGACGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTCGAGACACAAAACGCATGGGCAATGCATCAGGCTTAGCAGTGATAACTGTTATGCTGGTGACAACCTGCTTAATGTCTGTAGTCATCATCTTGTGCTGGCACAAAAGCTTTGTCTATGCCATTGCCTTCATACTCATTTTCGGGTCCATCGAATCACTCTACTTTTCAGCATCTCTCATCAAGTTTCGAGAAGGGGCCTGGGTTCCGATCGCCCTCTCACTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACACGCAAAAAATACGAGTTCGATGTTCAAAATAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGCCCCAGTTTAGGCATTGTGAGAGTACGTGGGATTGGCCTCATATACACCGAACTCGTCGCAGGAATCCCCGCTATCTTCTCCCACTTCGTAACAAACCTTCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCAGTCCCACATGTAAGACCTGGAGAAAGGTTTCTAGTAGGCAGAGTTGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCACGATACGGCTACCGTGACATCCACAAGGACGACATGGAGTTCGAGAAGGACTTGGTATGCAGCATTGCAGAGTTCATCCGTTCCGAGAAAGCAGAAACCAGCGTAAAGCTAGAAGATGCAGAAGAGAGTGAGAGAATGACAGTAGTAGGGACATCTTCAACAAATGTAGATGGAGTAAGAATGTGTGAAGATGAAGGAGAAACAGCAGAAACATCAGAGGCAAGAGAGATAAAATCACCAAAAAAACTGAGGAAAAGAGTGAGATTTCTTGTACCAGAGAGCCCACAAATGGAAACGGAAGCAAGGAGAGAGCTTCAAGAGCTAATGGAAGCTAGAGAAGCAGGAATGGCTTTCATAATGGGACATTCATATGTGAAAGCAAAGAGGGGATCAGGTTGGGTGAAGAAAGTGGTGATAAATTATGGGTATGATTTTTTGAGAAGAAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCATCTACTTTAGAGGTGGGAATGGTCTACCAAGTTTGA 2316 44.47 MDLESAIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGVDLTNKKTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPSISVFSAVSGLELSMAKPHHRYVEVPVACAILVILFAIQHYGTHRVGFLFAPVVITWLLCISAIGLYNIFYWNPHVYRALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGDSNYQIGFYVSVPEKLRLPVLVIAILAAVVGSQAVITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFVYAIAFILIFGSIESLYFSASLIKFREGAWVPIALSLIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVAGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAETSVKLEDAEESERMTVVGTSSTNVDGVRMCEDEGETAETSEAREIKSPKKLRKRVRFLVPESPQMETEARRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMVYQV* 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21404996 21409286 + Chy4G081930.1 Chy04g01475 225374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01475 771 Coils Coil 621 641 - -
Chy04g01475 771 PANTHER POTASSIUM TRANSPORTER 6 1 771 - -
Chy04g01475 771 Pfam K+ potassium transporter 25 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy04g01475 771 TIGRFAM kup: potassium uptake protein 23 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy04g01475 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01475 Chy09g00327 CCT
Chy04g01475 Chy09g00327 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01475 Chy-Chr4:21404996 Chy12g01121 Chy-Chr12:16186296 0 dispersed
Chy06g01443 Chy-Chr6:15380527 Chy04g01475 Chy-Chr4:21404996 0 transposed
Chy07g00842 Chy-Chr7:10959657 Chy04g01475 Chy-Chr4:21404996 8.67E-136 transposed
Chy10g00329 Chy-Chr10:8170016 Chy04g01475 Chy-Chr4:21404996 0 transposed
Chy12g00312 Chy-Chr12:3377780 Chy04g01475 Chy-Chr4:21404996 0 transposed
Chy10g00917 Chy-Chr10:14824992 Chy04g01475 Chy-Chr4:21404996 0 wgd
Chy04g01475 Chy-Chr4:21404996 Chy09g00327 Chy-Chr9:2823954 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01475 K03549 - csv:101211664 1511.89