Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01478 ATGGAGCGCAGTTTTCTTTACAAGGAATTCGCTCCACTCGCCGGCATGATCGCCGCCGAGTGCGCCACCGTCGGCTCTAACACAGTCTACAAAGCCATTTCCGGCCACCAAATCAGCTTCTATGTCTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTCCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGAGTTTTTCCGTCCGAGAAGTTGTCGTTCTTCTTAAGATTGATTAGCTTATCGGCTATGGGAGTTGGATGTCAACTATTTTCGTATAAAGGATTGGAGTATAGTTCACCAACGCTTGCTTCCGCCATTAGTAATCTCATTCCAGCTCTTACTTTCATCTTGGCCGTTCTTTTCGGGATGGAGAAAGTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAAATCGTTGGTTCAACAGTCTCCATAACAGGTGCACTGGTAGTGGTTCTTTATAAAGGTCCAATCATTCTACCAAACCCATTTTCTAGTCGAACAAGATTGAATCTTCCTCCTCCTCCCTTGGGCTCTTCCCAACCAAATTGGATTTTGGGTGGCCTCTGCTTCTTTTTTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACGATGAATATATATCCAGATGAACTAGTTGTGGTGTGTTTATTCTATGTTTTCGAGGTTTTAATATCTGCACCAATATGCCTATTAGCAGAAGGAAACTTGAGTGCTTGGAAGTTGAAAAATAGTATGGAAGTGGTTGCTGTTTTAAACTCGGGATGTGTGGGTCAATCCTTTGTCTCTGCAATCCATACATGGGGTGTACATGTGAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTTTCAATTGCCATTGCTGCTGTTACAGGTGTTATTTTCCTTGGGGATGATCTTCATCTTGGAAGTATAATTGGAGCAATAATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATCAAAGAAGAGGAGTTGAAGGGACAGGATGATTTCTCAAACTTGGAGTCTTCATCCAAAGATAAGATTCCATTGTTGAAAAGCTGTAAAGTTCAAGTTGACTAA 1089 42.7 MERSFLYKEFAPLAGMIAAECATVGSNTVYKAISGHQISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSEKLSFFLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKVALRSSSSIAKIVGSTVSITGALVVVLYKGPIILPNPFSSRTRLNLPPPPLGSSQPNWILGGLCFFFQYLLNSFWYIVLTQTMNIYPDELVVVCLFYVFEVLISAPICLLAEGNLSAWKLKNSMEVVAVLNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAVTGVIFLGDDLHLGSIIGAIIIASGFYSIMWGKIKEEELKGQDDFSNLESSSKDKIPLLKSCKVQVD* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21426457 21432549 + Chy4G081960.1 Chy04g01478 225377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01478 362 Pfam EamA-like transporter family 20 152 IPR000620 GO:0016020|GO:0016021
Chy04g01478 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
Chy04g01478 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Chy04g01478 362 PANTHER WAT1-RELATED PROTEIN 11 334 IPR030184 GO:0016021|GO:0022857
Chy04g01478 362 PANTHER WAT1-RELATED PROTEIN 11 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01478 Chy-Chr4:21426457 Chy09g00321 Chy-Chr9:2758108 4.29E-60 dispersed
Chy04g01478 Chy-Chr4:21426457 Chy04g01479 Chy-Chr4:21444995 1.87E-142 tandem
Chy10g00923 Chy-Chr10:14895853 Chy04g01478 Chy-Chr4:21426457 1.71E-43 wgd
Chy04g01478 Chy-Chr4:21426457 Chy09g00320 Chy-Chr9:2737732 3.20E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01478 - - csv:101211416 677.167