Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01479 ATGGGTTGGAAGTTGTTTTACAAAGAATTTGTGCCATTCGCTGCCATGGTTGCGGCGGAGTTCGCCACCGTTGGCTCCAACACCGGCTTCAAAGCCGCCACAGCTCGAGGCCTCAGCTACTATGTCTTCACCCTCTACGTTTGCATCGTCGCCGCCGCCGCCCTCATCCCTTTCGCCATCTTCTTCCATAAGTCGGCAGAGGTTCCTCCCAACAAGACTTCCTTCTTTTTCCAGATCGTTTGCCTCTCTGCACTCGGGCTTTCTTGTCAGTTGCTTGGAAACAAAGGACTTGAGTATAGCTCACCAACACTTTCATCCGCCATTAGCAACTTAATTCCAGCTTTCACTTTCATGTTGGCTGTCTTTTTTGGAATGGAGAAGATAGAGTTGGAAAGAAGCAGCAGCATTGTGAAAATAGTGGGCTCAGCGGTGTCCATATCAGGTGCTTTGGTCGTGGTTTTGTACAAAGGCCCAATTGTTATATCAAACCCATATTCTCCTGGCCCAAAACAATTGGACTCTTCACATCCTCAGCCCAATTGGATAATGGGTGGCCTTTGCTTTGTTTTTCAGTACCTTTGCAATTCCTTTTGGTACATTCTTCAGACCAAAATCATAAAAGTATACCCAGATGAGATAACTGTGGTGGCAGTATACTATTTTATTCAAGCACTTTTGACTGCTCCAGTTTGTTTGATAGCAGAAACAGATATGAATGCTTGGAAGCTAACAAATCCACTCATTTTCCTTTTCATCTTCAACTCGGGTTTGATGGGGCAGTCATTTGTGGCTGCTATACACACATGGGGACTAAACATGAAGGGCCCTGTTTATGTTTCTAGTTTTAGGCCATTGTCCATTGCCATTGCTGCTGCCATGGGTGCCATTCTTCTTGGTGATGATCTTCATCTTGGAAGTATAATTGGAGCAATCATAATATCAATTGGGTTTTATGGCATATTGTGGGGAAAAGCAAAAGAAGAAGAATTGAAGGGCTTAGAAGATGTTTGTGCGTTGGAATCTTCATCCAAAGCTCCATTGTTGCTATATTATAAACTTGAAGAAGCATAA 1071 43.79 MGWKLFYKEFVPFAAMVAAEFATVGSNTGFKAATARGLSYYVFTLYVCIVAAAALIPFAIFFHKSAEVPPNKTSFFFQIVCLSALGLSCQLLGNKGLEYSSPTLSSAISNLIPAFTFMLAVFFGMEKIELERSSSIVKIVGSAVSISGALVVVLYKGPIVISNPYSPGPKQLDSSHPQPNWIMGGLCFVFQYLCNSFWYILQTKIIKVYPDEITVVAVYYFIQALLTAPVCLIAETDMNAWKLTNPLIFLFIFNSGLMGQSFVAAIHTWGLNMKGPVYVSSFRPLSIAIAAAMGAILLGDDLHLGSIIGAIIISIGFYGILWGKAKEEELKGLEDVCALESSSKAPLLLYYKLEEA* 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21444995 21449139 + Chy4G081970.1 Chy04g01479 225378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01479 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 156 - -
Chy04g01479 356 PANTHER WAT1-RELATED PROTEIN 10 330 IPR030184 GO:0016021|GO:0022857
Chy04g01479 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 326 - -
Chy04g01479 356 PANTHER WAT1-RELATED PROTEIN 10 330 - -
Chy04g01479 356 Pfam EamA-like transporter family 192 321 IPR000620 GO:0016020|GO:0016021
Chy04g01479 356 Pfam EamA-like transporter family 24 146 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01479 Chy09g00321 CCT
Chy04g01479 Chy09g00321 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01479 Chy-Chr4:21444995 Chy09g00320 Chy-Chr9:2737732 7.24E-91 dispersed
Chy04g01478 Chy-Chr4:21426457 Chy04g01479 Chy-Chr4:21444995 1.87E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01479 - - csv:101211165 650.588