Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01488 ATGGGGATTCTGAAGCTTCTCTTCGTTCTTCTTTCAACGGCGTCGTTTTATTCTCTATCGGAATCCCTTCCTCTCACCGCGAATTACTACCAGAAATCCTGCCCGAGATTCAGTCAGATTGTCCAAGATACAGTCACCAACAAACAGATCACTAGTCCTTCCACCGCTGCTGGTACTCTTCGTCTTTTCCTCCACGACTGCCTTCCCAACGGCTGTGACGGCTCTGTTCTTATCTCCTCCACTCCTTTCAACAAAGCCGAGCGCGATGCCGACATCAATCTCTCTCTCCCAGGCGACGCCTTCGATGTTATCGTTCGAGCCAAGACTGCTCTCGAACTCGCATGTCCCAACACTGTCTCTTGTGCTGACATTCTCGCCCTTGCCACTCGTGACCTCGTCACCATGGTTGGCGGACCTTACTACAATGTTCTTCTTGGTCGTAGAGATGGACGTGTGTCTAAAGCTTCGACGATTCCGGGTTCTTTACCGAAAGCTACCTCGCCGATTCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTGTGCAGGAAATGGTAGCCTTAAGCGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGTTCTCAGATCTATAATTATAGCAAGTCGTCTTCTTATGATACGCAGTATAACCCTAGATTCGCGCAAGGGTTGCAAAAGGCTTGTTCTGGTTATGACAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAACAAATTTGATAACTCTTACTTCCAGAATCTGCCGAAGGGATTGGGGATCTTGAAGTCTGATCATGGGTTGTATAATGATTGGAGGACGAGGCCATTCGTCGAGGCGTATGCGGCGGATGAGAAGAAGTTCTTCAATGATTTTGCTCGAGCGATGGAGAAGTTGAGTAATTATAAAGTTGTGACAGGGAATCAAGGGGAGATTAGGCATAAGTGTGATGCGATTAATTGA 981 46.48 MGILKLLFVLLSTASFYSLSESLPLTANYYQKSCPRFSQIVQDTVTNKQITSPSTAAGTLRLFLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILALATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGSLPKATSPIPQIIDIFKARGFTVQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSYDTQYNPRFAQGLQKACSGYDKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLYNDWRTRPFVEAYAADEKKFFNDFARAMEKLSNYKVVTGNQGEIRHKCDAIN* 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21546024 21547004 + Chy4G082060.1 Chy04g01488 225387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01488 326 Gene3D Peroxidase, domain 2 163 305 - -
Chy04g01488 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PANTHER PEROXIDASE 31 6 326 - -
Chy04g01488 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Chy04g01488 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Chy04g01488 326 PANTHER - 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g01488 326 Gene3D - 28 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01488 Chy-Chr4:21546024 Chy11g00234 Chy-Chr11:2187809 1.34E-87 dispersed
Chy12g00902 Chy-Chr12:14426837 Chy04g01488 Chy-Chr4:21546024 2.84E-85 dispersed
Chy01g00685 Chy-Chr1:4981703 Chy04g01488 Chy-Chr4:21546024 2.75E-19 transposed
Chy12g01291 Chy-Chr12:17389527 Chy04g01488 Chy-Chr4:21546024 4.22E-142 wgd
Chy02g02553 Chy-Chr2:28790326 Chy04g01488 Chy-Chr4:21546024 9.43E-136 wgd
Chy04g01488 Chy-Chr4:21546024 Chy09g00313 Chy-Chr9:2677518 5.13E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01488 K00430 - csv:101219829 647.891