Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01489 ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGACTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTTTTCTGTTTGGATCATCGCGGTTTCAAATCCCACGACTGCCCTGAATCTGATCGGAACAGCAGAAAAGTTGTGGTCTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGGAAGGACGGCGGCGACGAGACCAAGGTCCTTGAGAGGCATCACGAATCAGGGGATTGCGATCCAAGGAAGAAGAAGAAGCCCACGTGTGCGGTGAAGCGGTGCCGGGAAATTCTTACGTTTTCGAATACTTGTGTGTGTAAAACCTGCCGGTTGAAAGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATGGATGTGGAGGTCCGTCGTCAAGGGCAGGGGCGGTGGTAGATAAAGGGCGGTGGAATGAGAAGTTTATGGTGGCTTTGGGGTTGAGGAGCGAGGGGGATTGTGGGAAGAGGGAACGTGGAAGGACGGGGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA 588 56.29 MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLDHRGFKSHDCPESDRNSRKVVVCEICSTSIETTGKDGGDETKVLERHHESGDCDPRKKKKPTCAVKRCREILTFSNTCVCKTCRLKVCLKHRFPAEHGCGGPSSRAGAVVDKGRWNEKFMVALGLRSEGDCGKRERGRTGAKGSSPTAPSVKAC* 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21551749 21552416 + Chy4G082070.1 Chy04g01489 225388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01489 195 SUPERFAMILY AN1-like Zinc finger 10 56 IPR035896 -
Chy04g01489 195 MobiDBLite consensus disorder prediction 171 195 - -
Chy04g01489 195 Gene3D - 2 70 IPR035896 -
Chy04g01489 195 ProSiteProfiles Zinc finger AN1-type profile. 11 59 IPR000058 GO:0008270
Chy04g01489 195 ProSiteProfiles Zinc finger AN1-type profile. 98 148 IPR000058 GO:0008270
Chy04g01489 195 Pfam AN1-like Zinc finger 17 54 IPR000058 GO:0008270
Chy04g01489 195 Pfam AN1-like Zinc finger 104 142 IPR000058 GO:0008270
Chy04g01489 195 Gene3D - 80 155 IPR035896 -
Chy04g01489 195 SMART AN1_Zf_4 104 145 IPR000058 GO:0008270
Chy04g01489 195 SMART AN1_Zf_4 17 56 IPR000058 GO:0008270
Chy04g01489 195 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 177 - -
Chy04g01489 195 SUPERFAMILY AN1-like Zinc finger 64 148 IPR035896 -
Chy04g01489 195 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 7 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01489 Chy-Chr4:21551749 Chy08g00455 Chy-Chr8:11156660 5.56E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01489 - - csv:101220304 417.542