Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01546 ATGATGAAGTGGAATAATTGGATATGGGGAGTGGGTTTATTGTGGTTCTTGGGATTGCTGGGATTATGGGGATGGAGAATTGTGAATTGGGTTTGGCTTAGGCCAAAGAGGCTTGAGAAGTTGTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGCTTTATGTTTGGTGATACAAAGGAGATTGGGGTGGCCGTCCGGCAAGCAAGATTGCAGTCCATGACCTTCTCTCATGATATTGCTTCACGTGCCACTCCTTCCTCTTATCCCACCATCCACAAATATGGTAAGAATTCTTTCACATGGATTGGAACAACACCAAGAGTGTATATAACAGAACCAGAACAAGTGAAGATTGCTTTCTCTCAAATAAATGATATTCGAAAGACATCTTCATTTCCCCTTAGACGAAGAATGGGTAGTGGACTTGTGACTCTCGAGGGATCTAAATGGGCCAAACATAGAAAAATCATCAACCCTGCTTTTCACATGGAGAAGTTAAAGGAAATGTTTCCGGCATTCTCGAAGAGTTGTAGAGAAATGGTTAACAAATGGGAAAAGATGATTAATGAAGAAGAAAGTTGTGAAATAGATGTGTGGCCTGATTTACAAAATATGACTGCTGATGTGATTTCAAGAACTGCTTTTGGAAGTAGTTATGAGGAAGGAAAAAAAATCTTCCAACTCTTGAAAGAGTGGGCAATGCTATTGATGTCATACCTAACGAAGAGAGCTTATTACATTCCAGGGGCGAGGTATATACCAACAAAATTAAACAAGAGGATGCAAGAGATTGATACGAAAATACGAGATATGGTTCGGGGTATTATAAACAAAAGACAAAATGCTATGAAGAAAGGTGAAGCTTCCAACAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGCAAGTCAAATTGAAGAACACAACAACAAGAAAGATGTTGGACTGAGCATAGAAGAAGTAATTAGTGAGTGCAGGCTTTTCTATTTTGCCGGTCAAGAAACCACAGCTGTATTACTTGCTTGGACAATGGTTCTACTCGGTCGATACTCAGAGTGGCAAGATCGAGCAAGAGCAGAAGTCTTGGAGGTTTTTGGCGATAACAAGAAATTGGATTTCGATGGTCTAAGTCGTCTAAGAGTAGTAAATATGATACTCAATGAAGTTCTTAGGCTGTACCCTCCAGTTGGAATGTTAGCTCGAGAGATTCACAATGAAACAAAATTGGGGAATTTGACATTACCGAGTGGAGTATCAATAGGAGTACCAATCTTAAGCATGCACCAGAATCCCAAAATATGGGGTGAAGATGCAATTGAGTTCAACCCAGAAAGATTTGCAGAAGGAATTTCCAAAGCAACAAAGAATCAAGTATGCTTTATTCCTTTTGGATGGGGTCCTCGTATTTGCATTGGTCAAAACTTTGCAATGATTGAAGCCAAAATAGCATTATCGATGATTTTGCAACAATTCTCATTTACACTTTCTCCAACTTATACTCATGCTCCTATCACACATATCACTATTCAGCCACAACATGGAGCTCATCTCATCCTTCGTAAACTGTAA 1575 39.56 MMKWNNWIWGVGLLWFLGLLGLWGWRIVNWVWLRPKRLEKLLRQQGLAGNSYRFMFGDTKEIGVAVRQARLQSMTFSHDIASRATPSSYPTIHKYGKNSFTWIGTTPRVYITEPEQVKIAFSQINDIRKTSSFPLRRRMGSGLVTLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCREMVNKWEKMINEEESCEIDVWPDLQNMTADVISRTAFGSSYEEGKKIFQLLKEWAMLLMSYLTKRAYYIPGARYIPTKLNKRMQEIDTKIRDMVRGIINKRQNAMKKGEASNNEDLLGILLESNASQIEEHNNKKDVGLSIEEVISECRLFYFAGQETTAVLLAWTMVLLGRYSEWQDRARAEVLEVFGDNKKLDFDGLSRLRVVNMILNEVLRLYPPVGMLAREIHNETKLGNLTLPSGVSIGVPILSMHQNPKIWGEDAIEFNPERFAEGISKATKNQVCFIPFGWGPRICIGQNFAMIEAKIALSMILQQFSFTLSPTYTHAPITHITIQPQHGAHLILRKL* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22097947 22101845 + Chy4G082640.1 Chy04g01546 225445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01546 524 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 22 521 - -
Chy04g01546 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Chy04g01546 524 SUPERFAMILY Cytochrome P450 91 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 Gene3D Cytochrome P450 35 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 Pfam Cytochrome P450 94 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 521 - -
Chy04g01546 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01546 524 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01546 Chy-Chr4:22097947 Chy07g00478 Chy-Chr7:3817021 0 dispersed
Chy04g01546 Chy-Chr4:22097947 Chy05g01336 Chy-Chr5:17483442 4.73E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01546 - - csv:101207867 1020.38