Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01575 ATGGCGACCTCAAAACCCCAAAGGTCACCTGAGGAGGTCGAAGATATCATCCTTCGTAAAGTCTTCTTAATTTCTCTCACCGATACCTCCGATTCTGATTCCAGAATCGTCTATCTCGAGCAAACCGCCGCCGAACTTCTTAGCGAAGGCAAACCATTGAGGATTTCAAGAGATGTAATGGAGCGCATCATAATCGATCGTCTTTCTGCCCATGTCCCCTCCGCCGAACCCCCTTTTCAGTACCTAATTGGGTGCTACCGTCGAGCTCACGACGAGACTAAGAAAATCGCTTCCATGAAGGATAAGACTTTGCGCTCTGATATGGAAATTGCTCTTAAGCAAGCCAAGAAGTTGACGATTTCGTATTGTAGGATTCATTTAGGGAATCCTGAATTGTTTTCTTCCGGTGCTGATTTAGGTACTAACTCCAACACTTCGCCTTTGCTTCCTTTGATTTTCTCTGAGGTCGGTGGGAGTTCCATGGATGGATTTGGGGCTAGTACTAGTGTTGGTGGAGCCTATCAGTGCCCTCCGGGTTTCCTGGAGGAGTTTCTCCGTGACTCGGATTTTGATACATTAGAACCCATTTTGAAGGGGTTGTATGAGGATTTAAGGGGTAGTGTCCTTAAAGTTTCTGCTCTTGGGAACTTCCAGCAGCCCTTAAGAGCACTCAGGTTTCTGGTCAGCTTTCCTGTCGGTGCTAAATCTCTTGTGAATCACCCTTGGTGGATTCCTACGGGTAAATATTCCAATGGGCGTGTCATTGAGATGACAAGCATTTTGGGGCCTTTCTTCCATGTCAGTGCTCTGCCTGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGCCAGCAGTGCTTTTCAGAAGCATCAACTCGTAGACCAGCTGATTTACTATCTTCATTCACTACAATTAAAACAGTCATGAATAACTTATATGATGGCCTTTCGGAAGTTCTTCTCTCCCTTCTTAAGAACACAGAGACCCGTGAAAATGTTATTGAGTATCTGGCAGAGGTGATAAATAGAAACTCATCAAGGGCTCATATACAGGTTGATCCTCTCTCCTGTGCAAGTTCGGGCATGTTTGTTAATCTCAGTGCCATCATGCTACGTCTTTGTGAGCCTTTTCTAGATGCAAACTTGACCAAAAGGGATAAAATTGATCCAAAATATGTATGTTATAGTAACCGATTGGAGTTGAGAGGATTAACTGCTCTACATGCTTCATCTGAAGAAGTTACCGAGTGGATTAATAATGGTACTCAGTTGAGAACTGATAACCCTGGACAGTCCAGCGACAGTGAAAGTCGCTTGCTGCAATCCCAGGAGGCTTCCAGTTCTGGCAGTAATGCTACTATTGGATCTTCTACTGCAAAAGCAAGATCGAGTAGTGATAAAACTAGGTACCCGTTTATATGTGAGTGCTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCAGACTTCAAGCATTTAGTACAGGATATATCTAGGTGTGAAGATACATTGTCCACGCTTAAAGTTATGCAGGGACAAGGCCCTGCCCCACACCTTGAAATGGATATAGGTCGCCTTGAGAAGGAAATAGAGTTGTACTCACAGGAAAAACTTTGTTATGAAGCTCAAATACTGAGGGATGGGACACTGATCCAGCAAGCTCTTACTTTCTATCGATTAATGGTCATCTGGTTAGTTGGTTTGGTTGGTGGATTTAAAATGCCTCTTCCATCAGCTTGCCCAATGGAATTTGCATCCATGCCAGAACATTTTGTGGAAGATGCTATGGAATTGCTTATATTTGCTTCTCGGATTCCAAAAGCTTTGGATGGCATCAATTTGGATGATTTTATGAACTTCATTATTATGTTCATGGCAAGTCCCGAATATATTAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATTCCTCGTAGAAGTGGTTCATCCGTAACGGCAACACTATTTGAAGGCCACCAACTATCGCTTGAGTATCTTGTTAGGAATCTTTTAAAACTCTATGTAGACATCGAGTTTACTGGATCACATACACAGTTTTATGACAAGTTTAACATCCGTCATAATATTGCTGAACTTCTGGAATACCTTTGGCTGGTTCCTAGTCATCGAAATGCTTGGAGAATGATTGCCAAGGAAGAGGAGAAGGGCGTTTACTTGAATTTCTTGAACTTCCTAATCAACGATAGCATATATCTTCTTGACGAAAGCCTTAATAAGATTCTCGAACTTAAAGAGCTTGAAGCTGAAATGTCAAATACTGCAGAATGGGAACAGCGACCTGCTCAAGAGAGGCAGGAAAGAACTCGGCTCTTTCACTCCCAAGAAAATATCATCCGAATCGATATGAAATTAGCAAATGAGGACGTGAGTATGCTGGCATTTACTTCAGAGCAAATCACAGCTCCTTTCCTACTTCCAGAGATGGTTGAAAGGGTGGCCAGCATGCTTAATTATTTTCTCTTGCAACTTGTTGGTCCTCAGCGAAAATCTCTTAGTCTGAAAGACCCTGAAAAGTATGAATTCCGTCCAAAAGATTTGCTTAAGCAGATTGTTCAAATATATGTTCATCTGGCAAGAGGAGATACGGAGAATATTTTCCCAGCTGCCATTTCAAAGGACGGCCGATCATACAACGAGCAGTTGTTCACTGCTGCAGCAGCTGTACTTAGACGTATTGGAGAAGATAGTAGGATAATACAGGAGTTTACTGATCTTGGTAACAAAGCCAAAGATGCAGCTTCTGAGGCAATGGATGCTGAAGCTACTCTAGGAGATATACCCGACGAGTTCCTCGACCCAATCCAATACACTTTAATGAAGGACCCTGTGATCTTACCTTCTTCGAGGATCACCGTCGACAGACCCGTCATTCAAAGACATCTCCTCAGCGACAGCACCGACCCATTCAACCGGTCTCATCTGACCGCGGACATGCTAATACCGAATGAAGAACTGAAAGCAAGAATCAAAGAATTTATTAGGTCACAAGAACTGAAGAAGCAACTAGATGGAGGGGTTGCAATGCAGAGCAGCAAGGCAACCATCCAACCCACAAGTGGAGAAATGTTGATTGATTAA 3129 42.98 MATSKPQRSPEEVEDIILRKVFLISLTDTSDSDSRIVYLEQTAAELLSEGKPLRISRDVMERIIIDRLSAHVPSAEPPFQYLIGCYRRAHDETKKIASMKDKTLRSDMEIALKQAKKLTISYCRIHLGNPELFSSGADLGTNSNTSPLLPLIFSEVGGSSMDGFGASTSVGGAYQCPPGFLEEFLRDSDFDTLEPILKGLYEDLRGSVLKVSALGNFQQPLRALRFLVSFPVGAKSLVNHPWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMNNLYDGLSEVLLSLLKNTETRENVIEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYSNRLELRGLTALHASSEEVTEWINNGTQLRTDNPGQSSDSESRLLQSQEASSSGSNATIGSSTAKARSSSDKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKVMQGQGPAPHLEMDIGRLEKEIELYSQEKLCYEAQILRDGTLIQQALTFYRLMVIWLVGLVGGFKMPLPSACPMEFASMPEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWLVPSHRNAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKDLLKQIVQIYVHLARGDTENIFPAAISKDGRSYNEQLFTAAAAVLRRIGEDSRIIQEFTDLGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNEELKARIKEFIRSQELKKQLDGGVAMQSSKATIQPTSGEMLID* 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22294985 22303790 - Chy4G082930.1 Chy04g01575 225474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01575 1042 Coils Coil 521 548 - -
Chy04g01575 1042 Pfam Ubiquitin elongating factor core 261 926 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Chy04g01575 1042 MobiDBLite consensus disorder prediction 422 460 - -
Chy04g01575 1042 CDD RING-Ubox_UBE4A 945 1013 - -
Chy04g01575 1042 ProSiteProfiles U-box domain profile. 942 1016 IPR003613 GO:0004842|GO:0016567
Chy04g01575 1042 SUPERFAMILY RING/U-box 935 1013 - -
Chy04g01575 1042 Pfam U-box domain 943 1013 IPR003613 GO:0004842|GO:0016567
Chy04g01575 1042 PANTHER UBIQUITINATION FACTOR E4 1 1020 IPR045132 GO:0000151|GO:0030433|GO:0034450
Chy04g01575 1042 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 942 1020 IPR013083 -
Chy04g01575 1042 SMART Ubox_2 946 1009 IPR003613 GO:0004842|GO:0016567
Chy04g01575 1042 PANTHER - 1 1020 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01575 K10597 - csv:101211398 2013.81