Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01583 ATGGAAGTTCTAAGAACAAGGGTCGGTGGCAGTGGGCTTCTGGTGGCCGTTGCGGCAGTGGTGGTACTGCTGGCGGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGAATACTAATGTGAACTATACTACCTGGGCTCAGGGAAAGCACTTCTATTATGATGATTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCATTTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGGCCTTATTACTTCATAAGTGGAAAAGGCTTTTGCTTTGGAGGCATGAAGCTTGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGTCCTCGCCCTTGAACGAAAAGAGCAGTGCTCTTAGATCTACCTACACTAGCCACACCCCATTCGTTTTAACCGCTGTTTTCGCCATTGCTGCTGTACTTGAAGCTTTTGCTCGGGTCTGGTAG 540 49.26 MEVLRTRVGGSGLLVAVAAVVVLLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYTSHTPFVLTAVFAIAAVLEAFARVW* 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22340579 22341967 + Chy4G083010.1 Chy04g01583 225482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01583 179 Pfam Plastocyanin-like domain 43 124 IPR003245 GO:0009055
Chy04g01583 179 PANTHER LAMIN-LIKE PROTEIN 13 171 - -
Chy04g01583 179 Gene3D - 31 134 IPR008972 -
Chy04g01583 179 PANTHER BLUE COPPER PROTEIN 13 171 IPR039391 GO:0009055
Chy04g01583 179 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Chy04g01583 179 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01583 Chy-Chr4:22340579 Chy09g01153 Chy-Chr9:13780922 1.89E-22 dispersed
Chy04g01583 Chy-Chr4:22340579 Chy04g01584 Chy-Chr4:22345020 4.04E-28 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01583 - - csv:101210415 324.324