Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01624 ATGGGTTTCTTATCATCTCTCTCCAAACAGAGGGGTTTTATCATTTTCTTGAATCTCTCGTTTCTCTTAGTGGGTTCTGCTTTTTTGGTGAATCGGTTTCACTCCACAGAATCCCATTTCCATGTTCTTAACAAAAGCTCGAGAAGAATCCATGGCAACCCTCAGGAAGATTGCAAGAGTTTTATTGCTTTAACTGAGTCTGAAGCTAAGTGCTCTGTTCTTAAATCCAACAACCCCTGTGACACCCAAGGATATATAGATTATCTTTACATTTTCTATTGTGAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTCGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCAAAATTGTTGAATCTTTCCCCAACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCTAGCCTTGTTGCTTTCATGGGGGATGGAACTAGTGATATTGGCTTGAATACTGTTCTCGGCGGAGCCTCGTTTGTTACTTGCGTCGTTGTTGGAATCATAAGTATTTTGCTGCGTCGGCGACGGATGAAGGTGAATAGGTCTGGCTTCATTAGAGATGTTTTGTTCTTTCTCTTGGTTCTTTTGTCTGTTTTCTTGATATTGCTTCGTGGTCATATCAATCTGTGGGCTTCCATTGGCTTTTCTTCCATGTATATTGTTTATGTTTTGGTTGTTTATGTTTCCCATGCCCAGTGGTTGAATTTTAGAAGTGACATCTGCGAACCTCTTTTGAAAGAGCCATCAAAGGATGAGTTTGAGGGTCGAAATGAATCACAGGACAACAGTGACGATGATGACGATGTTAGAATCGATGTATATGATATCTGTTTTTGTCCAAGATTATCACCTTCCTGTCTTTTTTTCCTTCGCATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCTGCCATTGCTGAAGAAAACTGGTCTAGAGTATATGCAGTTGCTTCAGTGATATTGGCCCCAGTTCTCTTATCTCTTCTATGGGCATTTCACCACCAGGGCGAGCCGTCTCAATCTAACCTGATCATCTGTGTTGTCGCTTTGCTGCTCGGAATTAGTTTTGGGATTGTTGCATTTGTGACAACAGAGAATTCAAGCCCACCAAAGAAGTGCCTCTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTATATTGTAGCTCAAGAACTGATAGGCCTATTAGTTTCACTTAGCTACATAATGGGCATAAGCCCTTCAATTCTAGGACTTACCTTTCTGGCTTGGGGAAACTCTCTAGGGGATTTGGTTGCAAACGTGACCATGGCCTTGAACGGCGGTCAGCGAGGTGCCCAAATCGCCATCTCCGGCTGCTATGCTGGCCCCATCTTCAACACTCTGTTTGGCCTCGGGATGTCACTTGTTGGCGCTTCATGGAAGAAGTATCCTGAGCCGATCGTCATCCCCCCAGACCCGTATGTCATGGAGACATTGGGACTATTGGTAGGAGGATTGCTTTGGGCAGTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCTGTGTTGGGAGGAGGCCTTCTTGCTATCTATTTAACATCTTTGCTCTTAAGGCTTTTGCAAGCTTTTGGTTCTTCCCATTAG 1704 43.6 MGFLSSLSKQRGFIIFLNLSFLLVGSAFLVNRFHSTESHFHVLNKSSRRIHGNPQEDCKSFIALTESEAKCSVLKSNNPCDTQGYIDYLYIFYCEYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRRRMKVNRSGFIRDVLFFLLVLLSVFLILLRGHINLWASIGFSSMYIVYVLVVYVSHAQWLNFRSDICEPLLKEPSKDEFEGRNESQDNSDDDDDVRIDVYDICFCPRLSPSCLFFLRILEIPLYLPRRLTIPAIAEENWSRVYAVASVILAPVLLSLLWAFHHQGEPSQSNLIICVVALLLGISFGIVAFVTTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELIGLLVSLSYIMGISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLVGASWKKYPEPIVIPPDPYVMETLGLLVGGLLWAVVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSH* 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22671095 22672798 - Chy4G083420.1 Chy04g01624 225523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01624 567 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016021|GO:0055085
Chy04g01624 567 Pfam Sodium/calcium exchanger protein 406 557 IPR004837 GO:0016021|GO:0055085
Chy04g01624 567 PANTHER CATION/CALCIUM EXCHANGER 2 6 565 - -
Chy04g01624 567 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 565 - -
Chy04g01624 567 Gene3D - 342 559 IPR044880 -
Chy04g01624 567 Gene3D - 139 264 IPR044880 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01282 Chy-Chr2:9403002 Chy04g01624 Chy-Chr4:22671095 3.38E-32 dispersed
Chy04g01624 Chy-Chr4:22671095 Chy08g01002 Chy-Chr8:17289168 1.99E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01624 K13754 - csv:101204766 1056.2