Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01632 ATGGATCGTCTCATCACCCTCGAACCCTCCAACCTCATTCCCATCCGAATCGAACCCCCCCACAAATGCTCCGGCGATCTCACCCTCCGTAACGTCATGTACACCATGCCTGTCGCCTTCCGACTCCAGCCTCTCATCAAATCCCGCTACACTTTCAAGCCCCAATCCGGAATCATTCCTCCACTCTCTACTTTAACAGTTGAAATCCTTTACCATCTTCCACCCGGCGTCAATCTCCCCGATTCCTACCCTTATTCCGATGACTCTTTCCTCCTCCACAGCGTCGTCGTCCCCGGCGCCGCTATCAAAGACTCTTCCTCAAGCTTCGATTCTGTTCCTTCCGATTGGTTCACTACCAGAAAGAAACAGGTGTTTATCGACAGTGGGATTAAAGTCATGTTCGTGGGGTCGGCAGTGTTGGCGAGATTAGTGGCGGATGGGGCTATGGATGAGATTAGAGAGGTGTTGGAGAGGAGTGATCCGAGTTGGAGGGCCGTGGACTCTGTGGATGAAAAGGGGAGGACTCTTCTTCACTTGGCGATCGGGCAGGGGAGAGCGGATTTGGTGCAGTTGCTGTTGGAGTTCAATCCGGATGTGGGGAAAGTGGGGGAGAGTGGGATGACGGCGGTGGAGGCAGCGGCGGGGGCTGGGCAGGCGTTGATTGTGGAGCTGTTATTGGCGAGGAAGGCGAGTACAGAGCGGGGGGAAGGATCTGTTTTTGGAGCGATTCATTTGGCAGCGGCGGGAGGGCATGTGGAAGTGTTGAGGCTGCTATTGGTGAAAGGAGCTTGTGTTGATGCTCTGTCAAAGAGTGGAGATACGGCACTGCATCTGGCCGTTCAAGAGCGCCGCCGTGATTGTGCTCGGTTGCTTCTCGCCAATGGCGCTAAACCTGATGTTCGTAGTGCTGAACAAGGAGATACGGCGCTGCACATGGCCGCAAGAATCGGTGACGAGCAAATTGTTAAGCTTTTAATTCAAAAAGGAGCCAACAAAGACATCCGAAACTGGGCTGGAAAGCGTCCATACGACGTTGCATTTGACCACTCCCACACCCGCCTCTTCGACGTCCTCCTCCTTGCCGACAAGCTTGCCACTGCAGCACGCAAGGGCGACGTCCGCTCAATCCAACTCCTCGTCGACAGTGGTGCTGCTATCAATAGTCGCGATCAAAACGGCTGGACAGCGCTCCACAGAGCTGCCTTCAAAGGCCATACTGATGCCTCAAGAGCCCTCATCGATATCGGTATAGATGTCAATGCTAAGGACGACGACGGCTATACTGCACTTCACTGCGCTGTCGAGGCTGCTCATGATAATGTTGTCCAAGTACTCGTCGAGAGAGGCGCCGACGTCGAGGCGGTGACAAATAAAGGGTTGAGTGCAATGCAAATTGCTCAGTCGATGCAGTATACAAGGACTATGAGGATTTTGATGCACGGTGGTGTGGATAAAGACACGAACGTGCCACCAACTCGAACGACGTCATGGCAGGCGTTGACGAAGAAGAAACAACAGAGTAAAGGGAGAGGGAGAATTAGGAATTTAAGGAGTACGGACTTTGATAAATCAGTGGCATTGTCAGTGGTGTGA 1593 53.17 MDRLITLEPSNLIPIRIEPPHKCSGDLTLRNVMYTMPVAFRLQPLIKSRYTFKPQSGIIPPLSTLTVEILYHLPPGVNLPDSYPYSDDSFLLHSVVVPGAAIKDSSSSFDSVPSDWFTTRKKQVFIDSGIKVMFVGSAVLARLVADGAMDEIREVLERSDPSWRAVDSVDEKGRTLLHLAIGQGRADLVQLLLEFNPDVGKVGESGMTAVEAAAGAGQALIVELLLARKASTERGEGSVFGAIHLAAAGGHVEVLRLLLVKGACVDALSKSGDTALHLAVQERRRDCARLLLANGAKPDVRSAEQGDTALHMAARIGDEQIVKLLIQKGANKDIRNWAGKRPYDVAFDHSHTRLFDVLLLADKLATAARKGDVRSIQLLVDSGAAINSRDQNGWTALHRAAFKGHTDASRALIDIGIDVNAKDDDGYTALHCAVEAAHDNVVQVLVERGADVEAVTNKGLSAMQIAQSMQYTRTMRILMHGGVDKDTNVPPTRTTSWQALTKKKQQSKGRGRIRNLRSTDFDKSVALSVV* 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22747666 22749913 - Chy4G083500.1 Chy04g01632 225531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01632 530 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Chy04g01632 530 Gene3D - 132 235 IPR036770 -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Chy04g01632 530 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 528 - -
Chy04g01632 530 Gene3D Immunoglobulins 1 131 IPR013783 -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat region circular profile. 172 199 - -
Chy04g01632 530 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 364 391 IPR002110 GO:0005515
Chy04g01632 530 Gene3D - 236 362 IPR036770 -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat region circular profile. 242 267 - -
Chy04g01632 530 SUPERFAMILY PapD-like 2 147 IPR008962 -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Chy04g01632 530 MobiDBLite consensus disorder prediction 482 512 - -
Chy04g01632 530 PRINTS Ankyrin repeat signature 441 455 IPR002110 GO:0005515
Chy04g01632 530 PRINTS Ankyrin repeat signature 393 408 IPR002110 GO:0005515
Chy04g01632 530 Pfam Ankyrin repeats (many copies) 412 466 IPR002110 GO:0005515
Chy04g01632 530 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 1 528 - -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 242 270 IPR002110 GO:0005515
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Chy04g01632 530 ProSiteProfiles Ankyrin repeat region circular profile. 425 454 - -
Chy04g01632 530 SUPERFAMILY Ankyrin repeat 166 487 IPR036770 -
Chy04g01632 530 SMART ANK_2a 392 421 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 238 267 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 305 334 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 458 487 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 425 454 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 205 234 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 172 201 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 271 300 IPR002110 GO:0005515
Chy04g01632 530 SMART ANK_2a 359 388 IPR002110 GO:0005515
Chy04g01632 530 Pfam Ankyrin repeat 306 336 IPR002110 GO:0005515
Chy04g01632 530 Gene3D - 363 525 IPR036770 -
Chy04g01632 530 MobiDBLite consensus disorder prediction 488 504 - -
Chy04g01632 530 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Chy04g01632 530 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
Chy04g01632 530 Pfam Ankyrin repeats (3 copies) 159 231 IPR002110 GO:0005515
Chy04g01632 530 Pfam Ankyrin repeats (3 copies) 242 301 IPR002110 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01632 Chy08g00556 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01614 Chy-Chr1:22041615 Chy04g01632 Chy-Chr4:22747666 1.45E-07 dispersed
Chy03g00122 Chy-Chr3:1151399 Chy04g01632 Chy-Chr4:22747666 1.29E-11 dispersed
Chy04g01632 Chy-Chr4:22747666 Chy10g01375 Chy-Chr10:17970899 9.59E-21 dispersed
Chy04g01632 Chy-Chr4:22747666 Chy05g00955 Chy-Chr5:14157902 8.28E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01632 - - cmo:103486915 994.956