Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01670 ATGGGAAAGAGTGAAGAAGAACAGCCACTGCCGGTTGGAGTGAGCTCCTCTGAGCTTTCTGACCGGAATGTGGAGAACAGATGCGGCGGCGGTGGGTGCTCTGAGATTCGCAGACTGATTGCGGTGAGATGTGTGTTCTTCCTGTTACTATCAGCGGCTGTGTTTCTCTCTGCTATTTTTTGGCTGCCACCGTTCCTATCCTATGGAAATTGGCCGGATCGGCCTGTTGATTCTGCTTATAGAGATCATGACATAGTAGCGAGTTTTCATGCTTGGAAGCCAGTTCCTTTTCTGCAAAACCATATTTTTGAGCTTGAGGATAACATTTTCGGAGAAATACCCATACCTTCTGTCAAGGTGGCTATCCTCTCACTACAATCATTAGGTGGACCAAATGTAACAAAAATAGTTTTTGCGGTAGATTCTGATGCCAAGTACTCAAAAATTCCCCCAACATCTCAAAGTTTAATCAAGGAAACCTTTGAAACATTGGTTATAAATGAACCTCCTCTCAGATTGAATGAATCTTTATTTGGCAATACATCCTTATTCGAGGTGTTGAAATTTCCTGGAGGAATAACTATTATTCCTCCTCAGAGTGCATTTCTTCTTCAGACGGCGCAGATCTATTTCAATTTTACGTTAAATTATTCTATATATGAAATTCAAGTGAATTTCAATGATCTTTCCAGCCAGCTGAGGTCGGGATTACGTCTATCTCCTTATGAGAATTTATATGTTAGCCTATCGAACGAGAGAGGTTCTACAATTGATGCACCCACTGTTGTCCAATCATCTGTCCTGATGGCAATTGGGACTAATTTATCTTCATCGAAACAAAGGCTGAAACAGTTGGCTCATACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACCGTATTTGGTAAGGTCAAGCAGGTGCAACTTTCATTTCTAAACCACTCTCTTGGTGGTGGTGGAAATGCACGGTCGCCTTCACCTGCACCTCTGCCTCATTCCCACCACCACCACTACCACCACCGTCACCACCACCACCACCATCACCATCATCACCACCATCACCACCATCACCACCACCACCACCACCACCACCACAACCACCACCGGGACGCTGCATATTCACCAAGTCCTGGAACAGAGGAGCACAAACATGCACCGAAGAACGGGGTCTCATCTGCTCCCGAAGCTGGTTCTTCCCCAATGGAAGGTCCAACTTCAAGAAAAAGAAACTACGAAGCAACCCCACCTGCTTTTCGTTATGGATATAAAAGGTCGTTAACAAAACTCAGAAAACATAATTTAGGCCCCATTCCTTCTCCAAGCAGTTCTCCATCGTCGCCATACTTACGAGTAGGCCAGCCAGCACCCGTCTCTGATTCTATTTCTGCATCTAGTCCACTGTCAGGTGTAGTTTTATCTAATGTACAGCCTCCAAATACAGGCAGTGGACATGCAGAAAATTTTGAAAGAAGTTCCCCTTCAGTCTTACCACCACAAGTTTCTTGTGTTCGTGTTTATACTATTCAATGGACACTTGCGCTATTTCTACTCTTCTCGGCAATGGCGATCACCATTGTTGACCATGAAGTTCCCTCCGATTCCCACAATTACTTCGACATAACTATCGACACTTACGAGCCAATTCTCACTCTTCTCACCACTTCACCATCCATGGTAGACGATTGGATTTCACAAACCCTCACCATTCAAACTCCACCTTTCCTCGTCGGCCTCGACATCGAATGGCGCCCTAACAATCGCTCCTACGAAAATCCTGTTGCCACCTTACAACTCTGCATAGGCCGCCGCTGCCTGATCTTGCAATTGCTTCACATGCCAGAGATCCCTAAATCTCTGTTTGAGTTTTTGGAAAACGAATCATTCACATTCGTAGGAGTGGGAATCGACGAAGATGCGGAAAAGCTTAACTGTGACTACGGATTGAAAGTGGGGAAGAGAATGGATCTGAGGGATTTGGCTGAGAGGGTAACGGGAAGAGGAGAATTGAAGAATGCGGGATTGAAGAGATTGGGGAAAGAAGTGTTGGGGAAAGAGATTCATAAACCGAAGAGTGTGACGATGAGTAGATGGGATCAAGAATGGCTTACGCTTAATCAGGTGAAGTATGCTTCTATTGATGCGTTTTTCTCGTTTGAGATTGGAAAGTTTTTGCAATCTGAATCCTAG 2196 44.81 MGKSEEEQPLPVGVSSSELSDRNVENRCGGGGCSEIRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSYGNWPDRPVDSAYRDHDIVASFHAWKPVPFLQNHIFELEDNIFGEIPIPSVKVAILSLQSLGGPNVTKIVFAVDSDAKYSKIPPTSQSLIKETFETLVINEPPLRLNESLFGNTSLFEVLKFPGGITIIPPQSAFLLQTAQIYFNFTLNYSIYEIQVNFNDLSSQLRSGLRLSPYENLYVSLSNERGSTIDAPTVVQSSVLMAIGTNLSSSKQRLKQLAHTITNSHSGNLGLNNTVFGKVKQVQLSFLNHSLGGGGNARSPSPAPLPHSHHHHYHHRHHHHHHHHHHHHHHHHHHHHHHHHNHHRDAAYSPSPGTEEHKHAPKNGVSSAPEAGSSPMEGPTSRKRNYEATPPAFRYGYKRSLTKLRKHNLGPIPSPSSSPSSPYLRVGQPAPVSDSISASSPLSGVVLSNVQPPNTGSGHAENFERSSPSVLPPQVSCVRVYTIQWTLALFLLFSAMAITIVDHEVPSDSHNYFDITIDTYEPILTLLTTSPSMVDDWISQTLTIQTPPFLVGLDIEWRPNNRSYENPVATLQLCIGRRCLILQLLHMPEIPKSLFEFLENESFTFVGVGIDEDAEKLNCDYGLKVGKRMDLRDLAERVTGRGELKNAGLKRLGKEVLGKEIHKPKSVTMSRWDQEWLTLNQVKYASIDAFFSFEIGKFLQSES* 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23092629 23097709 + Chy4G083880.1 Chy04g01670 225569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01670 731 PANTHER F20B24.21 1 358 - -
Chy04g01670 731 MobiDBLite consensus disorder prediction 373 391 - -
Chy04g01670 731 Gene3D - 542 729 IPR036397 GO:0003676
Chy04g01670 731 MobiDBLite consensus disorder prediction 318 421 - -
Chy04g01670 731 SMART 35exoneu6 559 728 IPR002562 GO:0003676|GO:0006139|GO:0008408
Chy04g01670 731 CDD WRN_exo 556 725 - -
Chy04g01670 731 Pfam 3'-5' exonuclease 560 730 IPR002562 GO:0003676|GO:0006139|GO:0008408
Chy04g01670 731 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 354 521 - -
Chy04g01670 731 SUPERFAMILY Ribonuclease H-like 568 728 IPR012337 -
Chy04g01670 731 MobiDBLite consensus disorder prediction 1 24 - -
Chy04g01670 731 MobiDBLite consensus disorder prediction 434 466 - -
Chy04g01670 731 PANTHER F20B24.21 354 521 - -
Chy04g01670 731 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 358 - -
Chy04g01670 731 MobiDBLite consensus disorder prediction 333 372 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01670 Chy-Chr4:23092629 Chy08g00222 Chy-Chr8:5040189 4.16E-123 dispersed
Chy04g01670 Chy-Chr4:23092629 Chy04g01671 Chy-Chr4:23100046 9.12E-43 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01670 - - csv:101213172 905.205