Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01674 ATGGACATGGGTAGATCGTTGCTGGAAGTTGCGATGGCAATTGACCAGGCCGAGCTTAGCACTGAGCAGGTTCTTAGAAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAGTGGAACAAGCCTTCAGTTGTTAAGGCGTTATGATAACAGACCAGAGAGTTACAGGGCGCAGCTATTGGATGATGATGGTCCAGCATATGTTCGGGTATTTGTTAGCATTTTACGCGATATATTTAAGGAAGAAACGGTGGAATATGTTCTAGCATTAATCGATGAAATGCTTACAGCGAACCCAAAAAGAGCAAGATTGTTCCATGATCCTTCTCTTGCAAGTGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAAGGAAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCGCTGATAGTGAGTGCTAGACCGAAAACTCATGATGGGAGTTTTGCAAATGATGATTCCTCGAACTCCAAGAACAAAAATACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTACAGACTTCGATCAATTGCCTTGCAACTCTGCTGAAGGAACCAAAGGTCAGATCCTCCTTCGTTCAGACAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTATTCAGCTTCTATACGAAACTTGTCTGTGTGTTTGGCTCTTGTCATATTATGAGCCGGCAATTGAATTCTTGGCTACCTCTAGGTCCCTTCCAAGACTCATCGACGTTGTCAAGAGTTCTACAAAAGAGAAGGTTGTCCGAGTTATTATTTTGACCTTGAGGAACCTACTCCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTTGGACTACCACAAGTTGTTCAAAGTTTGAAATCACAAGCATGGAGTGATGAGGACCTTTTGGAGGCTTTGAATCAACTAGAAGAGGGGCTGAAAGATAACATCAAGAAACTAAGTTCTTTCGACAAGTACAAGCAAGAAGTCCTCCTCGGGCATCTTGACTGGTCTCCTATGCACAAAGATGTCAATTTCTGGCGAGAAAACATTACAAGCTTTGAAGAGAACGACTTGAAGATATTGAGGGTCCTAATCACAATTCTGGATAGTTCCAGTGATCCAAGGGCTTTGGCAGTTGCTTGTTTTGATCTTTCTCAGTTCATTCAACACCATCCAGCTGGGAGAATTATAGTGACAGATCTCAAGGCCAAAGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAGGTTACCAAATATGCCCTCCTTTGCATTCAAAGGCTCTTTCTTGGTGCCAAGTATGCTAGCTTTCTACAGGCTTAA 1398 42.49 MDMGRSLLEVAMAIDQAELSTEQVLRRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDPSLASEDAYEPFLRLLWKGNWFIQEKSCKILALIVSARPKTHDGSFANDDSSNSKNKNTTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVRSSFVQTDGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRSLPRLIDVVKSSTKEKVVRVIILTLRNLLHKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLEALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDLKILRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRIIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA* 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23123095 23130826 + Chy4G083920.1 Chy04g01674 225573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01674 465 Pfam V-ATPase subunit H 18 336 IPR004908 GO:0000221|GO:0046961|GO:1902600
Chy04g01674 465 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 14 465 IPR004908 GO:0000221|GO:0046961|GO:1902600
Chy04g01674 465 SUPERFAMILY ARM repeat 21 455 IPR016024 -
Chy04g01674 465 Pfam V-ATPase subunit H 342 454 IPR011987 GO:0000221|GO:1902600
Chy04g01674 465 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 411 418 IPR018506 GO:0020037
Chy04g01674 465 Gene3D - 356 457 IPR038497 -
Chy04g01674 465 PIRSF V-ATP_synth_H 6 464 IPR004908 GO:0000221|GO:0046961|GO:1902600
Chy04g01674 465 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 14 465 - -
Chy04g01674 465 SMART arm_5 415 455 IPR000225 GO:0005515
Chy04g01674 465 SMART arm_5 254 295 IPR000225 GO:0005515
Chy04g01674 465 SMART arm_5 209 253 IPR000225 GO:0005515
Chy04g01674 465 CDD VATPase_H 15 459 - -
Chy04g01674 465 Gene3D - 14 344 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01674 K02144 - csv:101217015 889.412