Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01676 ATGGGATTAGTCTTTGGCCATTTCTTCCAAAATGCAATGCCATACATCGCAGTCATCTCCCTCCAATTCAGCTACGCCGGACTGAACATCCTCTCTGCCATCGCCCTCAATGGTGGTATGAGTCACTACGTTCTTGTCGTCTACAGTCAGGTCTTTGCTACTGCGATCATGGCGCCCTTTGCTCTCATTCTCGAGAGGAAATTTAGACCAAAGATTACAGTTAAGATTTTCATTCAGATGTTCGTTCTTGCTCTTCTTGGGCCATTGCTTGATCAAAACTTATACTACATGGGGCTAAAATTGACATCTCCAACAATCGCTTGCGCCATAAGCAACATTCTTCCTTCAATGACATTTGCTATGGCAGTCATTTGCAAGATAGAAAAGTTGGACTTGAAAAGAGTGAGATGTCGAGCGAAGTTGTTGGGAACAATAGTGACCCTAGGTGGAGCCATGTTGATGACATTTTATAGAGGAAGTATCGTCAACTTTCTCGGCACAAAGCACGGCCGCCAACCGAACACACCTTCCACGGCCGTGCACAACCACCACAAAAAGGGAGAGTACATCAAAGGCTCCATTTTGCTCATCATCTCCGCTTTGGCTTGGGCAGCCTTCTTCGTCCTCCAAGCAATAACCTTGAGAAAATACACAGCCCATCTTTCTCTCACCGCCTTGGTTTGCTTTCTGGGAACCCTTCAGGCCATTGTTGCCACCCTTGCCATGGAGCGTCGCCTCTCCGTCTGGACCATCGGTTGGGAATGGAACCTTCTAGCATCCGCTTATGCAGGAATTGTGACAACAGGGGTGGCATATTATGTTCAAGGTCTGGTTATGAAAACAAGAGGGCCAGTTTTTGTTACAGCTTTTGGTCCTATGGTAGTAGTGATTGTTGCCTTCATGGGTCATTTCATCTTGGCTGAAGAGATTTATGTTGGAGGGATAATTGGAACAGTGGTGATTGTAATAGGGTTATACTTTGTTTTGTGGGGAATGTCTAAGGAAAGCAAAGAGAAGAAGGAAGAAGTTATTGGAGAGATTATTGTTGAAGGAATAATAGACGAAGGTGATCATCATGATCATCAATTGCCTATGATAAATGAAGGTATTCAATTAGCAATTGATCAAAAGAAAGAGGGCTTGGCCATTACTACTATTCCATCCATGGCTTCACCTAATAACATGGAAAAAGAGGCCTCAAGACACTAA 1209 44.25 MGLVFGHFFQNAMPYIAVISLQFSYAGLNILSAIALNGGMSHYVLVVYSQVFATAIMAPFALILERKFRPKITVKIFIQMFVLALLGPLLDQNLYYMGLKLTSPTIACAISNILPSMTFAMAVICKIEKLDLKRVRCRAKLLGTIVTLGGAMLMTFYRGSIVNFLGTKHGRQPNTPSTAVHNHHKKGEYIKGSILLIISALAWAAFFVLQAITLRKYTAHLSLTALVCFLGTLQAIVATLAMERRLSVWTIGWEWNLLASAYAGIVTTGVAYYVQGLVMKTRGPVFVTAFGPMVVVIVAFMGHFILAEEIYVGGIIGTVVIVIGLYFVLWGMSKESKEKKEEVIGEIIVEGIIDEGDHHDHQLPMINEGIQLAIDQKKEGLAITTIPSMASPNNMEKEASRH* 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23141239 23143872 - Chy4G083940.1 Chy04g01676 225575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01676 402 PANTHER WAT1-RELATED PROTEIN 9 364 IPR030184 GO:0016021|GO:0022857
Chy04g01676 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 331 - -
Chy04g01676 402 Pfam EamA-like transporter family 14 155 IPR000620 GO:0016020|GO:0016021
Chy04g01676 402 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Chy04g01676 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Chy04g01676 402 PANTHER WAT1-RELATED PROTEIN 9 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01676 Chy-Chr4:23141239 Chy08g00232 Chy-Chr8:5223604 2.25E-139 dispersed
Chy04g01676 Chy-Chr4:23141239 Chy04g01678 Chy-Chr4:23148707 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01676 - - csv:101212451 637.876