Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01679 ATGGATATCTCTGTTCTAACACTAACACCCTTCATTTTCCTCACTTTTTTCTCTTTTTCCATTTACTTTCTCTTCTTCACTTCAACAAAATCAAAATCCAAACCCCAACAAGGCTTCAAACACTACCCCTTTGTTGGAACCTTGCCCTTATTCTTACTGAATCGCCACCGTTTTCTCGACTGGTCGACAGAGGTTTTGAAAAACTGCCGAACGAACACGGCGGTGTTCAAACGGCCAGGCAAAGTCCACGGCGTAATCACGGCAAACCCACTTGTTGTTGAGCATATACTAAAGACCCAATTTGAGAATTACCCAAAAGGAGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGCAGAGGAATTTTTAACTCGGACGGAGAAATTTGGAAAGTACAGAGGAAGACGGCGAGTTATGAATTCAATACGAAATCGTTGAGAAATTTCGTTATGGAGAATGTTAGAGTTGAGATTCAGAGTAGGTTGTTGCCTATTTTTGGAAAAGCTTGTGAAACGGAACGGATTTTGGATCTACAGGATGTTTTGGAACGGTTTGCGTTTGACAATGTTTGTAAATTGGCTTTTAATTATGACCCTGCTTGTCTCGGCGGCGGTGGCACTGCGGCCGCTGAGTTTATGCGTGCTTTTGAGGACGCCGCCAATGTCAGCGCCGGCAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTTAACATAGGATCAGAAAAAACCCTAAATGAATCAATAGCCGTAGTTCACAAATTTGCTGAAGACATCATCCATTCAAGATTAGAAGAAAAGAAAACAACCCAAATAGAAAACGATCAAGATTTATTATCTCGGTTCATGGGCGAGCAAAACAATTCTCCACAATTCCTTCGAGACATAATCATAAGCTTCATCCTCGCCGGTCGAGATACCACTTCATCAGCTCTAACATGGTTCTTCTGGATCTTATCCTCTCGACACGATGTCCAACAAAAAATCCTCGCAGAACTCGAAACAATCCGAACAAAAGCACATAAGGAAATTGGAGAAATGTATAGCTTCGACGAACTGCGTGACATGCACTATCTACAAGCAGCTATATCAGAGACTCTCCGTCTATACCCACCGGTGCCAATCGATACAAAAGCATGTCGAAACGACGACGTATTACCCGATGGGACGTTTATTGGGAAGAGTTGGTTTGTGACGTACCATACGTATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGGATTGTGGAGAATATTCGCCAGAGAGGTGGTTGGAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGGTTCCCGATATTTCATGCGGGGCCGAGGATGTGTTTGGGGAAGGACATGGCTTATATTCAGATGAAGTGCATAGCTGCAGCAGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAGAGTCCAAAGCATTTGTTGTCGTTGACATTGAGGATGGAGAATGGTTTAGAAGTGATGATCAAAAAGAGAGAGGGGGGTTTGTCCATCTGA 1536 43.1 MDISVLTLTPFIFLTFFSFSIYFLFFTSTKSKSKPQQGFKHYPFVGTLPLFLLNRHRFLDWSTEVLKNCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEIQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGGGTAAAEFMRAFEDAANVSAGRFMYAFPGLYKVKKFFNIGSEKTLNESIAVVHKFAEDIIHSRLEEKKTTQIENDQDLLSRFMGEQNNSPQFLRDIIISFILAGRDTTSSALTWFFWILSSRHDVQQKILAELETIRTKAHKEIGEMYSFDELRDMHYLQAAISETLRLYPPVPIDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKDCGEYSPERWLENGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKCIAAAVIEKFEVEMVEKKKSPKHLLSLTLRMENGLEVMIKKREGGLSI* 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23172375 23174090 + Chy4G083970.1 Chy04g01679 225578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01679 511 PANTHER CYTOCHROME P450 19 503 - -
Chy04g01679 511 Gene3D Cytochrome P450 22 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Chy04g01679 511 PANTHER OS01G0804400 PROTEIN 19 503 - -
Chy04g01679 511 Pfam Cytochrome P450 78 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 SUPERFAMILY Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01679 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01008 Chy-Chr1:10559765 Chy04g01679 Chy-Chr4:23172375 2.06E-151 dispersed
Chy04g01679 Chy-Chr4:23172375 Chy12g00710 Chy-Chr12:10630154 4.10E-133 dispersed
Chy06g00223 Chy-Chr6:1444221 Chy04g01679 Chy-Chr4:23172375 2.68E-103 dispersed
Chy04g01679 Chy-Chr4:23172375 Chy02g02656 Chy-Chr2:29595310 3.52E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01679 - - csv:101211731 982.245