Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01700 ATGGAGGTTTTACAGGCACTTGATTCTCAGGTTCTCATTGGTTTAGCAGCGGCGTTGGTTGCCATTGTTGTTGGTGCTGTTTTCCTGTTTTCCTCCAGAAAACCCACATCCAGAGCCTGCTTGGATCCTGAGAAGTTTAAGGAGTTTAAGCTTGTGAAGCGTACTAAGCTGAGCCACAATGTGGCGAAGTTCACTTTTATACTTCCCAAGACTGATTCAATTCTTGGTCTTCCTATTGGACAACATTTAAGTTGCAGGGGGAAGGATAGCCAAGGTGAAGAAGTTATTAAATCTTACACCCCAACTACTTTGGATTCGGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGCAGGATGTCACATCATTTTCGAGAAATGCGTCTCGGGGAATCTCTTGCTGTAAAGGGACCAAAGGGACGTTTCAAGTACCAACCTGGTCAAGTTAGTGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACACCTATGTACCAAGTTTCTCGCGCTATATTAGAGAACCCAGACGACAAGACAAAGGTTCACCTTATTTACGCCAATGTTACTCTAGAAGATATTCTGTTGAAGGAGGAATTGGATCTCCTTGCCAAAAGATACCCTGATCGCTTCAAGATCTACTATGTGTTGAACCAGCCTCCTGAAGCTTGGGATGGCGGCGTTGGCTTTGTGTCTAAGGAAATGATTAAAGCACATTGCCCTGCGCCAGCTGCTGACATTAAGATTTTACGATGCGGTCCGCCACCGATGAACAATGCCATGGGCGAGCACCTTGACGTTCTTGGATATTCACCTGAAATGCAGTTTCAATTCTAA 843 44.72 MEVLQALDSQVLIGLAAALVAIVVGAVFLFSSRKPTSRACLDPEKFKEFKLVKRTKLSHNVAKFTFILPKTDSILGLPIGQHLSCRGKDSQGEEVIKSYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMRLGESLAVKGPKGRFKYQPGQVSAFGMLAGGSGITPMYQVSRAILENPDDKTKVHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPEAWDGGVGFVSKEMIKAHCPAPAADIKILRCGPPPMNNAMGEHLDVLGYSPEMQFQF* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23423112 23427313 + Chy4G084180.1 Chy04g01700 225599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01700 280 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 280 IPR001834 GO:0016491
Chy04g01700 280 CDD cyt_b5_reduct_like 49 280 - -
Chy04g01700 280 PRINTS Cytochrome B5 reductase signature 156 175 - -
Chy04g01700 280 PRINTS Cytochrome B5 reductase signature 250 258 - -
Chy04g01700 280 PRINTS Cytochrome B5 reductase signature 194 205 - -
Chy04g01700 280 PRINTS Cytochrome B5 reductase signature 97 104 - -
Chy04g01700 280 PRINTS Cytochrome B5 reductase signature 133 147 - -
Chy04g01700 280 PRINTS Cytochrome B5 reductase signature 75 86 - -
Chy04g01700 280 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 280 - -
Chy04g01700 280 Pfam Oxidoreductase NAD-binding domain 157 262 IPR001433 GO:0016491
Chy04g01700 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 156 175 IPR001709 GO:0016491
Chy04g01700 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 194 205 IPR001709 GO:0016491
Chy04g01700 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 250 258 IPR001709 GO:0016491
Chy04g01700 280 SUPERFAMILY Riboflavin synthase domain-like 41 149 IPR017938 -
Chy04g01700 280 Pfam Oxidoreductase FAD-binding domain 49 147 IPR008333 -
Chy04g01700 280 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 44 148 IPR017927 GO:0016491
Chy04g01700 280 Gene3D Translation factors 36 137 - -
Chy04g01700 280 Gene3D - 138 280 IPR039261 -
Chy04g01700 280 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 136 276 IPR039261 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01700 Chy08g00202 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01700 Chy-Chr4:23423112 Chy08g00202 Chy-Chr8:4773222 8.47E-159 dispersed
Chy04g01700 Chy-Chr4:23423112 Chy07g00682 Chy-Chr7:6605252 2.17E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01700 K00326 - csv:101212931 538.495