Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01751 ATGAGTATCGCTAAGCCGAGTGATTTAGACATACATTTGATAATTCTTCGACTCACCCTTCTCTTTAGATTGAAAGTTCGAATCTATGCACCCATATGTTCTGAATATGCATACTTACCTTTGTTATCCCAATGGTGTCAACCTAATTTAAATAGTCTGATGCACATGTGGGGGCATGGGTCACAGTACAGGAGAGGACCAGAATCGTTAAGAGGAACACAACCAACAGGGATGTTAAGGCTGCCATGTTATTGCTGTTCACCAGGTTGTCGCAACAACATTGACCATCCAAGAGCAAAGCCCTTAAAAGACTTTAGAACACTGCAAACTCATTACAAACGGAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCACTTAAAGACCATATCAAAGCCTTTGGTAATGGTCATGCTGCTTATAATCATAATAATAATAATAATAATAATCCTGATCTTCATCTTCATCGTCTTCATCGTCGTCGTCAACGGTTCGATAATGAAGAGGATGATCATGCTTATTCTGAAGTTGAGCAAGATCATGATTGA 651 39.17 MSIAKPSDLDIHLIILRLTLLFRLKVRIYAPICSEYAYLPLLSQWCQPNLNSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHNNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD* 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23886755 23887688 + Chy4G084690.1 Chy04g01751 225650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01751 216 PANTHER ZINC FINGER PROTEIN WIP2 52 212 IPR043584 GO:0003700|GO:0010468
Chy04g01751 216 Gene3D Classic Zinc Finger 98 179 - -
Chy04g01751 216 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 141 IPR013087 -
Chy04g01751 216 PANTHER ZINC FINGER PROTEIN WIP2 52 212 - -
Chy04g01751 216 SUPERFAMILY beta-beta-alpha zinc fingers 103 141 IPR036236 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy04g01751 Chy08g00030 CCT
Chy04g01751 Chy08g00030 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01751 Chy-Chr4:23886755 Chy08g00030 Chy-Chr8:1064979 4.60E-90 dispersed
Chy01g01870 Chy-Chr1:24122003 Chy04g01751 Chy-Chr4:23886755 3.10E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17905 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01751 - - csv:101208110 314.309