Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01760 ATGAATCTTCCTTCCATCTCTTCAAATTTCTTAAGCAAAGATGGAGGAGGAGATGATTTGGGAGAATTGGATCAAGCTCTTTTTCTCTATCTTGATGGACAAGAACCCTCTTCAACCACTACTCAAGACCAAAGACAGAGTTCGGGTATGAGACCTCCGACGTTGAATATCTTCCCGTCGCAGCCGATGCATGTCGATTCATTACCAATAAAAGGAAATACAACATTGATAAACCATGGTGGTGATTCAAAGATCAAAGCATCTGAGCCGTCCAAAGAGTTGGCCAACCAACGCAGCAATGGAGGAGCCATTGCATCTGCTCCAGCTCCAACCCAAACTACAACTACAACCGAACCTCATCCCAAACCTCCTAAACGTGAGCCAAACAAGAAAGGGCTCACCTCAAGTTCCGAGCAAGAAGGACCCAAAACTCCAGACCCTAAGACCTTAAGAAGATTAGCTCAAAATCGAGAGGCTGCTAGAAAAAGCAGGCTGAGAAAAAAGGCATATGTTCAGCAATTAGAGATGAGTAGGATTAAGCTGACGCAGCTGGAACAAGAGCTACAAAGAGCAAGAAATCAGGGTATGTTTTTGGGTGGAGGAGCCGCCATTTTAGGAGGACCTGACCAAGGACTTCCCTCCGGCTTCCATAACCTCAGCTCCGATGCTGCGGTGTTTGACATTGAGTACGGGAGGTGGCAAGAGGAACACCACCGGTTGATGTGCGAGCTACGAGCAGCGGTGCAAGAGCACCTACCGGAGAACGAGCTGCGGTTGTACGTGGACAGCTGCCTAGCCCATTACGACGAGGTCTTGAACTTGAAGATGATGGTGGCTAAATCGGACATATTTCACCTTGTGTCCGGCATGTGGAAGACTCCGGCGGAGAGATGCTTCATGTGGATGGGCGATTTTAGACCCTCTGAGCTCATTAAGATAATAATGGGTCAAATAGAGCCATTAACAGAGCATCAAATATTAAACATTTGTGCACTGCAACAATCAACACAAGAAAGTGAAGAAGCATTGTCTCAAGGACTTGAAGCTCTAAATCAATCATTATCGGACACTATCACCTCTGATTCATTGAGTAGCCCTCCAAATATGGCTAACTATATGGGCCAAATGACTTTAGCCATCAATAAGCTCTCTACTCTTGAAGGCTTTGTAAGACAGGCAGACAACTTGAGACACCAAACGGTTCACCGATTGCAACAAATGTTGACAACTCGACAAGCAGCAAGATGTTTGTTAGCCATTGCTGAATATTTCCATAGGCTTCGAGCTTTGAGTTCCTTGTGGTTGGCTCGTCCAAGGCAAGATTAA 1326 45.85 MNLPSISSNFLSKDGGGDDLGELDQALFLYLDGQEPSSTTTQDQRQSSGMRPPTLNIFPSQPMHVDSLPIKGNTTLINHGGDSKIKASEPSKELANQRSNGGAIASAPAPTQTTTTTEPHPKPPKREPNKKGLTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLEMSRIKLTQLEQELQRARNQGMFLGGGAAILGGPDQGLPSGFHNLSSDAAVFDIEYGRWQEEHHRLMCELRAAVQEHLPENELRLYVDSCLAHYDEVLNLKMMVAKSDIFHLVSGMWKTPAERCFMWMGDFRPSELIKIIMGQIEPLTEHQILNICALQQSTQESEEALSQGLEALNQSLSDTITSDSLSSPPNMANYMGQMTLAINKLSTLEGFVRQADNLRHQTVHRLQQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD* 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23957924 23964740 - Chy4G084780.1 Chy04g01760 225659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01760 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 190 IPR004827 GO:0003700|GO:0006355
Chy04g01760 441 Pfam Basic region leucine zipper 145 190 IPR004827 GO:0003700|GO:0006355
Chy04g01760 441 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 151 166 IPR004827 GO:0003700|GO:0006355
Chy04g01760 441 Pfam Seed dormancy control 241 315 IPR025422 GO:0006351|GO:0043565
Chy04g01760 441 PANTHER TRANSCRIPTION FACTOR TGA9 37 440 - -
Chy04g01760 441 SUPERFAMILY Leucine zipper domain 148 191 IPR046347 GO:0003700|GO:0006355
Chy04g01760 441 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 37 440 - -
Chy04g01760 441 Coils Coil 167 194 - -
Chy04g01760 441 MobiDBLite consensus disorder prediction 92 119 - -
Chy04g01760 441 CDD bZIP_HBP1b-like 148 197 - -
Chy04g01760 441 MobiDBLite consensus disorder prediction 31 151 - -
Chy04g01760 441 SMART brlzneu 144 207 IPR004827 GO:0003700|GO:0006355
Chy04g01760 441 MobiDBLite consensus disorder prediction 67 81 - -
Chy04g01760 441 MobiDBLite consensus disorder prediction 32 55 - -
Chy04g01760 441 ProSiteProfiles DOG1 domain profile. 223 437 IPR025422 GO:0006351|GO:0043565
Chy04g01760 441 Gene3D - 147 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01760 Chy-Chr4:23957924 Chy10g01378 Chy-Chr10:17993986 7.48E-128 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17908 PF14144 DOG1 6.70E-31 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01760 K14431 - csv:101204923 819.69