Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g01779 | ATGGCAGATTCCGAGGATATTCAGCCTCTCGTTTGTGATAATGGAACAGGGATGGTCAAGGCTGGATTTGCTGGAGACGATGCACCAAGGGCTGTATTCCCTAGCATTGTTGGTCGTCCCAGACACACCGGTGTTATGGTTGGTATGGGCCAAAAGGATGCCTATGTTGGTGATGAAGCTCAATCGAAGAGAGGTATATTAACTTTAAAATATCCCATTGAGCATGGTATCGTTAGCAATTGGGATGATATGGAGAAAATTTGGCATCACACTTTCTACAACGAGCTTCGAGTTGCTCCAGAAGAGCATCCAGTTCTGCTCACCGAAGCACCATTGAATCCCAAGGCGAATAGAGAGAAAATGACCCAAATAATGTTTGAAACTTTCAACACTCCCGCTATGTATGTTGCTATCCAGGCCGTCCTTTCCCTTTATGCCAGTGGTCGCACAACCGGGATCGTTTTGGATTCTGGTGATGGTGTCAGCCACACAGTTCCAATCTACGAAGGGTATGCTCTCCCACATGCCATCCTCCGTCTAGATTTGGCTGGCCGTGATCTCACAGATGCTCTAATGAAAATATTGACTGAACGTGGCTACTCATTCACCACCACCGCCGAGCGTGAAATTGTGAGAGACATGAAGGAGAAACTAGCTTATATAGCCCTGGATTACGAGCAAGAGCTAGAGACATCAAAAACCAGCTCTTCAGTGGAGAAGAGCTATGAACTACCAGATGGACAGGTGATCACCATCGGTGCTGAAAGATTCCGATGCCCTGAAGTTCTCTTCCAGCCATCCATGATAGGAATGGAAGCAGCTGGTATTCATGAAACCACATACAACTCTATCATGAAGTGTGATGTCGATATTAGAAAGGATCTCTATGGCAACATTGTCCTCAGTGGTGGTTCCACCATGTTCCCTGGCATTGCTGACAGGATGAGCAAGGAGATCACTGCATTAGCTCCAAGTAGCATGAAGATCAAAGTGGTAGCACCACCTGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTAGCTTCCCTCAGCACTTTCCAACAGATGTGGATTGCTAAGGCAGAATATGATGAATCTGGGCCATCAATTGTCCACAGGAAATGCTTCTGA | 1134 | 46.3 | MADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF* | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24120671 | 24123091 | - | Chy4G084970.1 | Chy04g01779 | 225678 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g01779 | 377 | PANTHER | ACTIN 3 | 1 | 376 | - | - | |
Chy04g01779 | 377 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
Chy04g01779 | 377 | PANTHER | ACTIN | 1 | 376 | IPR004000 | - | |
Chy04g01779 | 377 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
Chy04g01779 | 377 | Gene3D | - | 10 | 371 | - | - | |
Chy04g01779 | 377 | ProSitePatterns | Actins signature 2. | 358 | 366 | IPR004001 | - | |
Chy04g01779 | 377 | Gene3D | - | 140 | 340 | - | - | |
Chy04g01779 | 377 | SMART | actin_3 | 7 | 377 | IPR004000 | - | |
Chy04g01779 | 377 | Pfam | Actin | 5 | 377 | IPR004000 | - | |
Chy04g01779 | 377 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Chy04g01779 | 377 | SUPERFAMILY | Actin-like ATPase domain | 149 | 377 | IPR043129 | - | |
Chy04g01779 | 377 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Chy04g01779 | 377 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Chy04g01779 | 377 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Chy04g01779 | 377 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Chy04g01779 | 377 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Chy04g01779 | 377 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Chy04g01779 | 377 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Chy04g01779 | 377 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00298 | Chy-Chr1:2110223 | Chy04g01779 | Chy-Chr4:24120671 | 0 | dispersed | |
Chy02g01031 | Chy-Chr2:7030507 | Chy04g01779 | Chy-Chr4:24120671 | 0 | dispersed | |
Chy02g02375 | Chy-Chr2:27575528 | Chy04g01779 | Chy-Chr4:24120671 | 1.09E-12 | dispersed | |
Chy03g00095 | Chy-Chr3:950914 | Chy04g01779 | Chy-Chr4:24120671 | 1.27E-52 | dispersed | |
Chy04g01779 | Chy-Chr4:24120671 | Chy09g00409 | Chy-Chr9:3590471 | 0 | dispersed | |
Chy06g01882 | Chy-Chr6:22684874 | Chy04g01779 | Chy-Chr4:24120671 | 1.23E-34 | dispersed | |
Chy10g00535 | Chy-Chr10:11933729 | Chy04g01779 | Chy-Chr4:24120671 | 1.79E-18 | dispersed | |
Chy04g01779 | Chy-Chr4:24120671 | Chy08g00757 | Chy-Chr8:15277610 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g01779 | K10355 | - | psom:113309355 | 750.74 |