Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01907 ATGTGGGCAAGTGCCGAAGGAGGGCCGCCGGAGGTAACTCTGGAGACTTCCATGGGTTCTTTCACTGTCGAGCTTTACTTCAAACACGCACCGAGAACATGTAGAAACTTCATCGAGCTTTCCCGGCGAGGTTATTACGACAATGTCAAATTCCACCGGATTATTAAGGATTTTATTGTGCAAGGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAGTCTATTTATGGCAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCATACTGGAGCTGGTATTCTATCTATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCTTTAGATGGAAAGCACTCCATCTTTGGAAGAGTTTGTAGGGGAATGGAAATTATCAAAAGGCTTGGCAGTGTACAAACTGATAACAATGATAGACCCATCCATGATGTGAAAATACTGCGGGCATCAGTTAAAGACTAA 495 44.44 MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD* 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25100507 25103217 + Chy4G086250.1 Chy04g01907 225806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01907 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 5 163 - -
Chy04g01907 164 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 162 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 163 IPR044666 -
Chy04g01907 164 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755|GO:0006457
Chy04g01907 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 PIRSF Peptidylpro_ismrse 3 164 IPR024936 GO:0003755
Chy04g01907 164 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 161 IPR002130 GO:0000413|GO:0003755
Chy04g01907 164 Gene3D - 3 164 IPR029000 -
Chy04g01907 164 SUPERFAMILY Cyclophilin-like 11 162 IPR029000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01907 Chy-Chr4:25100507 Chy12g00717 Chy-Chr12:10735717 3.00E-52 dispersed
Chy05g00683 Chy-Chr5:8781528 Chy04g01907 Chy-Chr4:25100507 3.33E-13 dispersed
Chy06g00337 Chy-Chr6:2239187 Chy04g01907 Chy-Chr4:25100507 9.16E-07 dispersed
Chy04g01907 Chy-Chr4:25100507 Chy11g00439 Chy-Chr11:4303231 4.59E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01907 K12733 - csv:101222111 335.88