Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01943 ATGGAAATTTCCTTCCTTCTTCACCCAATTCTTCTCTTTCTCTTTTTTCTTATATTCATCTTTATAATCCTCTTTCTTTTGAGGCCAAAATTTCTATGCAACTGTGAAATCTGCCAAGCTTATTTGGCCTCATCTTGGTCCAAAGACTTCCATAACCTCTGTGATTGGTATTCTCATCTTCTTCGGCAATCTCCGACGAAGACCATTCACATCCACGTTTTAAGGAACACGATCACGGCCAATCCCGACAACGTGGAATATATTCTCAAGACAAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATCCTAGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGCGATTTGTGGCGGTTTCAGAAGAAAATGGCGATCACCGAGCTTGGTCAACAGTCGATTAGATCCTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGCCTTTTGCCGCTTCTTTCGTCTGTTGCCGATGGCGGCAGTGGCGGAGTTTTGGATTTACAAGACGTGTTTAGAAGATTTGCTTTTGATAGTATTTGTAAGTTTTCGTTTGGGTTGGATCCAATGTGCTTGGAGCTGTCGCTTCCCATGTCAGATTTCGCCGTCGCTTTCGATCTTGCTTCCAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGAAGAGAGAAGGAATTGAAGAAAGCAATAAAGTTAATCAACATGTTGGCTCATGAAGTAATTCGACAAAGAAGAAAACTAGGATTCTCGACCCATAGGGACCTCCTCTCCCAATTTATGCGAACCGTATCTGATGAGACTTTCTTACGAGACATCGTTGTTAGCTTTCTTTTAGCCGGTCGTGATACTATTGCCTCTGCCCTCACTAGCTTCTTTTGGGTGATTTCCACCCATCCTGCCGTAGAGCATGCTATCCAACTAGAGGCTGATCGAGTCATTGGCCCCAACTCGAACCCTACATCCTTTGACCAAATACGAAATCTCCACTACTTACGAGCTGCTATCTTCGAGTCCATGAGGTTGTATCCTCCCATTCAGTTTGACTCAAAGTTTTGCCAAAACGATGACATTTTACCCGATGGAACTTTCGTTCGACGTGGGACTCGAGTCAGTTACCATCCTTATGCAATGGGTCGAATGGAGCAAATTTGGGGAACAAACTGCCTGGAGTTCAACCCAGAACGATGGCTAAAAAACAATATATTTTGTCCTGAGAACCCGTTCAAGTATCCCATATTTCAAGGCGGATTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTGTTTGAGTTGAAAATTGTAGCAGTTTCAGTTATTCGTCATTTTCGAATCCAATCTACAACACCGTCGTCGTCTGTGGCACCACGATTCTCCCCTGGCCTCACTGCAACCTTTTGTGGTGGATTCAAAGTTTTAGTTAGTAAGAAGAGAAAATGGGAGTGA 1488 43.48 MEISFLLHPILLFLFFLIFIFIILFLLRPKFLCNCEICQAYLASSWSKDFHNLCDWYSHLLRQSPTKTIHIHVLRNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKKMAITELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGSGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSDFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGREKELKKAIKLINMLAHEVIRQRRKLGFSTHRDLLSQFMRTVSDETFLRDIVVSFLLAGRDTIASALTSFFWVISTHPAVEHAIQLEADRVIGPNSNPTSFDQIRNLHYLRAAIFESMRLYPPIQFDSKFCQNDDILPDGTFVRRGTRVSYHPYAMGRMEQIWGTNCLEFNPERWLKNNIFCPENPFKYPIFQGGFRFCLGKEMALFELKIVAVSVIRHFRIQSTTPSSSVAPRFSPGLTATFCGGFKVLVSKKRKWE* 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25338356 25340341 + Chy4G086610.1 Chy04g01943 225842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01943 495 Gene3D Cytochrome P450 41 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PANTHER CYTOCHROME P450 14 485 - -
Chy04g01943 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 14 485 - -
Chy04g01943 495 SUPERFAMILY Cytochrome P450 51 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01943 495 Pfam Cytochrome P450 67 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01943 Chy-Chr4:25338356 Chy12g00710 Chy-Chr12:10630154 0 dispersed
Chy04g01943 Chy-Chr4:25338356 Chy02g02656 Chy-Chr2:29595310 1.37E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01943 K20624 - csv:101207686 948.732