Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01945 ATGAATCACAAAATGCTCAAATTACCTTTAATTCTCACTTCCATTTTCCTCTTTGTCGCCGCCGTCTCTTCATCCAATAATGCTGACAGACAGGTAAAAACAAACCCCACCGCCGCACTTCATGGTGGTTTCCGCCATCCTCCGGCATATGTTGTGTACATGGGAGCATTGCCAAAATTAGAGAGTCATGAAGTTTTGGCAGATCATCATCATAGCCTTCTTGCTAATGCTGTTGGAGATGAGGAAATGGCAAGAAAAGCCAAGATTCATAGCTATGGAAGGAGCTTTAATGGATTTGCTGCAAGACTCTCGCCCCATGAAGCCAACAAGTTAGAAAAGGAAAAAAAAGTGGTGTCAGTATTTCGGAGCAAGACGAGAAAATTGCATACAACGAGATCATGGGATTTTTTGGGGCTCTCGGAGGCGGTGAGCCGGCGGAACGCTGCCGCAGAATCCAACGTAATCGTGGGACTATTGGATTCGGGGATATGGATGGAAGGTCCAAGTTTTAAAGACGATGGTTATGGTGAAATTCCTTCTAAGTGGAAAGGCAAATGTGTTACTGGTCGTAATTTCACTTCCTGTAACAGGAAAGTGATCGGCGCGAGGTTCTTCGACATTGAACAAATAGATAATTCCATCGATAAAAGCCCCGCCGACGAGATCGGTCACGGCTCCCACACCGCCTCAACAATCGCCGGAGCCTCCGTTGACGGCGCCAGTTTCTACGGCGTCGCCGGAGGAACGGCTCGCGGCGGCGTTCCGGGGGCGAGAATCGCGATGTACAAAGTGTGCTGGGTTGATGGGTGCAGTGACGTGGACTTGCTGGCCGGATTCGACCATGCAATCGCCGACGGAGTGGACATCATATCGGTGTCCATCGGCGGCGAGTCGACGGAATTCTTCAATGATCCGATCGCGATCGGATCCTTTCACGCAATGGAGAAAGGAATATTGACTAGTTGCTCGGCGGGAAACAGCGGGCCGGAATTAAAGACGGTGGAGAACACGGCGCCGTGGATAATGACGGTGGCGGCTTCTACAATTGATAGGGATTTCAGTACCGTCGTGAAGTTGGGTAACAATAAGAAGCTCTCTGGAGTATCAGTAAACACATTCACTCCAAAGAAGCAAATGCACCCTTTAATCTCCGGATCAAATGCTGCATTACCCAATCAATCCGATCCCTATCTTGATCCAAGTTGGTGTGATTCTGGGACTCTTGATGAGAAAAAAGTGAAAGGAAAAATAGTGTATTGTTTGGGATCAATGGACCAAGAATACACCATTTCTGAACTTGGAGGCAAAGGTGTAATTTCCAATCTTATGAACGTTACTGAAATGGCCATTACCACTCCTATTCCATCCACTCATCTTTCCTCTACCAATTCTGGTTATGTTGAAGCCTACATTAACTCCACCAAAAACCCTAAAGCTGTCATTTACAAAACTACTACAAGGAAGGTTGATGCTCCCTATTTGGCTTCCTTTTCTTCTAAAGGTCCTCAAACCATCGCTCTCAATATTCTTAAGCCGGACATTGCAGCACCGGGGGTGAACATATTAGCAGCATACTCAAATTTGGCTTCAATTACAAACAATAGACATTCCCTTTTCAATCTTCTTTCTGGTACTTCTATGGCTTGTCCTCATGCTGCCGCTGCGGCCGCCTATCTCAAAGCTTTTCACCCCACTTGGTCCCCCGCTGCCCTCAAGTCTGCACTTATGACCACCGCGACGCCATTGAAGATTGGAGATAAACTAGACGTGATTGGCGCCGGCACTGGCCAAATAAATCCGATCAAAGCGGTGCATCCAGGCCTCATTTACGACCTCTCTCGCACCTCTTACCTCTCTTTCCTCTGCACCCACAAACGCTACTCCGACTCCGACTCCGCCCTCGCCATCCTTACCGGAGACACCTCTTTAAACTGCTCCGACGTCCCGCAAGCCAGTGGCTTCGACGCCATCAACTACCCTTCCATGTACGTCCCCGTCGACCGAAACGCCACCTCTGTCTCCGCCGTCTTCCACCGGACCGTCACCCACGTTGGCTTCGGCCCATCGACGTACATAGCGAAGGTGAAATCGCCGGCAGGTTTGTCGGTGAAAGTCTCGCCGAAGACTCTGAAATTTGATCGGGCGTACAAAAAACTGTCGTTTAAGGTGGTGGTGAAAGGGGCAGCGCCGGCGGTGGGGCAGGCACCGTTGACGGCTTCACTTGAATGGGATGATTCTAAGCATTATGTTAGGAGCCCAATTTTGGTCTTTAAGGTTTAA 2280 49.08 MNHKMLKLPLILTSIFLFVAAVSSSNNADRQVKTNPTAALHGGFRHPPAYVVYMGALPKLESHEVLADHHHSLLANAVGDEEMARKAKIHSYGRSFNGFAARLSPHEANKLEKEKKVVSVFRSKTRKLHTTRSWDFLGLSEAVSRRNAAAESNVIVGLLDSGIWMEGPSFKDDGYGEIPSKWKGKCVTGRNFTSCNRKVIGARFFDIEQIDNSIDKSPADEIGHGSHTASTIAGASVDGASFYGVAGGTARGGVPGARIAMYKVCWVDGCSDVDLLAGFDHAIADGVDIISVSIGGESTEFFNDPIAIGSFHAMEKGILTSCSAGNSGPELKTVENTAPWIMTVAASTIDRDFSTVVKLGNNKKLSGVSVNTFTPKKQMHPLISGSNAALPNQSDPYLDPSWCDSGTLDEKKVKGKIVYCLGSMDQEYTISELGGKGVISNLMNVTEMAITTPIPSTHLSSTNSGYVEAYINSTKNPKAVIYKTTTRKVDAPYLASFSSKGPQTIALNILKPDIAAPGVNILAAYSNLASITNNRHSLFNLLSGTSMACPHAAAAAAYLKAFHPTWSPAALKSALMTTATPLKIGDKLDVIGAGTGQINPIKAVHPGLIYDLSRTSYLSFLCTHKRYSDSDSALAILTGDTSLNCSDVPQASGFDAINYPSMYVPVDRNATSVSAVFHRTVTHVGFGPSTYIAKVKSPAGLSVKVSPKTLKFDRAYKKLSFKVVVKGAAPAVGQAPLTASLEWDDSKHYVRSPILVFKV* 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25351439 25354861 + Chy4G086630.1 Chy04g01945 225844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01945 759 CDD PA_subtilisin_like 356 481 - -
Chy04g01945 759 Gene3D - 350 487 - -
Chy04g01945 759 Pfam Subtilase family 152 583 IPR000209 GO:0006508|GO:0008236
Chy04g01945 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 44 129 IPR037045 -
Chy04g01945 759 Gene3D Peptidase S8/S53 domain 153 617 IPR036852 GO:0004252|GO:0006508
Chy04g01945 759 Pfam Fibronectin type-III domain 657 756 IPR041469 -
Chy04g01945 759 SUPERFAMILY Subtilisin-like 128 608 IPR036852 GO:0004252|GO:0006508
Chy04g01945 759 Pfam Peptidase inhibitor I9 50 129 IPR010259 -
Chy04g01945 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Chy04g01945 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 759 IPR045051 -
Chy04g01945 759 PANTHER CUCUMISIN PROTEIN 37 759 - -
Chy04g01945 759 Gene3D - 621 758 - -
Chy04g01945 759 CDD Peptidases_S8_3 127 580 IPR034197 -
Chy04g01945 759 ProSiteProfiles Serine proteases, subtilase domain profile. 133 604 - -
Chy04g01945 759 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Chy04g01945 759 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Chy04g01945 759 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01945 Chy-Chr4:25351439 Chy10g00497 Chy-Chr10:11342656 0 dispersed
Chy07g01221 Chy-Chr7:17004907 Chy04g01945 Chy-Chr4:25351439 8.08E-87 transposed
Chy09g01382 Chy-Chr9:15573106 Chy04g01945 Chy-Chr4:25351439 0 transposed
Chy10g01235 Chy-Chr10:16978314 Chy04g01945 Chy-Chr4:25351439 0 transposed
Chy04g01945 Chy-Chr4:25351439 Chy08g00925 Chy-Chr8:16668331 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01945 - - csv:101210386 1249.19