Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01974 ATGGAGTTTTGGGGTGCCGAGGTTAAAGTTGGAGAACCTCTCTTGGTGAGTCCCGGAGAGGAGAAGATACTGCATCTGTCGCAGGCCTGTCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACCGGTTTTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTGTCCTCGGAGAAATTCCCACAAGTGTCTTTTGATCTGGTGTTTGACAAAGAATTTGAGCTATCTCATAATTGGAAAAACGGAAATACTGATTCGGAAGAGGATTTTCCTCTAGCTGTCACGGACAATGGAAAGCCAGAGCCAGAGCCTAAGAAAGATGCAAAGCCTGATACTTCTGGAACCAAGAAAAAAGTGCAGATTGTAGAACCAAGCAAAGTTGCCTCTAATTCAAATATTGACAGTAAGAAGAGTAAAGACAGTTCTGATGAAGATGATGACGAGGATGAGGAGAGCACAGATGATGAGAATGAAAATGGAGGTGAAGAAGATGATAGCGATGATGATGAAAATGAGTCTTCTGGAGTCGATAGTGAAGACTCTGATGAGGACTCGGATGACAGTTTGGAAGAGGATGAGCAGACACCAAAAAAGGCTGAAGCAAGCAAGAAGAGACCTTTAGATTCTGCTAATAAAACGCCTGCTCCCGATAAGAAGGCAAAACTCGTCACTCCTCAGAAAACTGATGGCAAGAAAGGGGTTGCTCATGTAGCTACACCTCATCCTTCAAAGAAGGCCGGGAAAATGCCCGCTGCTAATGACAAAAATAAACAGCAGACTCCCAAATCAGCAAATGCCGCATTCTCTTGCAAAACTTGCAACAGACCCACCGCCCTCTCTTTCTCTTCCCTTCCTTTCAATTCCCTCCGCCGCCTCTCCCCCAAACCTCTCCGATTTTCCTCTTCTCCCGCCTCCAAATCCACCATCTCCGCCACCATTTCCGTCGGCGACAAGCTTCCTGAATCCACATTTTCCTACTTAGACTCTGCCGGCGAGCTCCAAACCACCACTGTTTCCGACCTCACCAAGGGAAAGAAAGCTGTCTTCTTCGCTGTACCTGGTGCTTTCACCCCCACTTGCTCTCAGAAGCACCTTCCCGGTTTCGTCGAGAAATCGGCTGATCTTAAGGCCAAAGGAATTGATACTATCGCTTGTATTTCAGTCAATGATGCTTTTGTGATGAAGGCCTGGAAGGATAACCTTAATATCAAGGATGAGGTTCTGTTGTTGTCTGATGGGAATGGGGATTTCACTAGGGCTATTGGGTGCGAGTTGGATTTGAGCGACAAGCCTGTTGGATTGGGTGTTAGGTCGAGACGTTATGCGCTCCTTGCTGAGGATGGAGTTGTGAAGGTCTTGAATTTGGAGGAAGGAGGTGCGTTTACCTTCAGTAGTGCCGAGGACATCCTTAAAGCTCTTTGA 1431 46.82 MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVFLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKEFELSHNWKNGNTDSEEDFPLAVTDNGKPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKSKDSSDEDDDEDEESTDDENENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMPAANDKNKQQTPKSANAAFSCKTCNRPTALSFSSLPFNSLRRLSPKPLRFSSSPASKSTISATISVGDKLPESTFSYLDSAGELQTTTVSDLTKGKKAVFFAVPGAFTPTCSQKHLPGFVEKSADLKAKGIDTIACISVNDAFVMKAWKDNLNIKDEVLLLSDGNGDFTRAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKVLNLEEGGAFTFSSAEDILKAL* 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25621489 25628527 + Chy4G086920.1 Chy04g01974 225873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01974 476 MobiDBLite consensus disorder prediction 102 119 - -
Chy04g01974 476 MobiDBLite consensus disorder prediction 194 218 - -
Chy04g01974 476 MobiDBLite consensus disorder prediction 146 193 - -
Chy04g01974 476 Pfam Redoxin 318 473 IPR013740 GO:0016491
Chy04g01974 476 PANTHER PEROXIREDOXIN 260 476 IPR037944 -
Chy04g01974 476 ProSiteProfiles Thioredoxin domain profile. 316 476 IPR013766 -
Chy04g01974 476 SUPERFAMILY Thioredoxin-like 315 476 IPR036249 -
Chy04g01974 476 Gene3D Glutaredoxin 314 476 - -
Chy04g01974 476 Gene3D Nucleoplasmin core domain 1 88 - -
Chy04g01974 476 MobiDBLite consensus disorder prediction 81 266 - -
Chy04g01974 476 Pfam Nucleoplasmin-like domain 3 83 IPR041232 -
Chy04g01974 476 CDD PRX5_like 318 474 IPR037944 -
Chy04g01974 476 PANTHER PEROXIREDOXIN 260 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01974 Chy-Chr4:25621489 Chy11g00877 Chy-Chr11:12200903 2.08E-30 dispersed
Chy02g01846 Chy-Chr2:20770018 Chy04g01974 Chy-Chr4:25621489 1.23E-41 transposed
Chy11g00914 Chy-Chr11:12520279 Chy04g01974 Chy-Chr4:25621489 3.32E-29 transposed
Chy11g00876 Chy-Chr11:12194085 Chy04g01974 Chy-Chr4:25621489 7.05E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01974 - - csv:101207572 400.208