Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g01977 ATGGAGCTTCAAATTATTGCAGGGTTTATTTTACTATTATTTTTATGGGGTTTATGGCTGTGGCGCTGCCGTGGAGCGGGGGCCGATCGGCAACTTCCACCAGGGCCGCCATGTTGGCCGGTAGTTGGAAATTTGCTCCAACTAAGTTTTTCTGCTCACGAATCCTTCACAAAACTTGCTGCTAAGTATGGCCCAATCATGACCCTCCAACTCGGATCAATGAAAACAGTGGTAGTTTCCTCAAGCACGGTGGCGCGTGAGATGTTCAAAACACACGACGCGCCTCTTTCAGGACGAATGATATACGAAGCAATGAAAGGAGACCACGGCACACAAGGCTCCTTAATCACTTCCCAATACGGTCCTCACTGGCGGATGCTACGACGACTTGCCACATCGGAGTTCTTTGTTGCCCGCCAGCTCGAATCCATGAAACATGTCCGCCGCCACTGCATCGACGCCATGATCCGCCACGTCGAGGAAGGATGCCACCCGTGTGGGAACTCTCCGGGGTTGGACGTGGGGAAATTCATGTTCGTAATGGGCTTTAACTTAATTGGGAATTTGATATTTTCGAAAGATTTATTGGAGGCAAACTCGAAGAGGGGAAAGGAATTTTATTACCATACGAGAAAGGTAATGGAGATGGCCGGAAAGCCGAATGTGGCGGACTTTTTGCCGGCGTTACGGTGGTTGGATCCGCAAGGGATAAGGAGGAAGACGCAATTTCATGTGAATAAAGCGTTTGAAATTGCTGGGGAATTTATAAAAGAGAGATTATTAATAAGGGAAAAAAGAGATATTATTAATGATGATGATGATGATGAGAAAAAAGAAGAAAACAGGAAAAAAGATTACTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGAGTTGAGGAGCCTTCTCGTTTCTCTTCTTGGATCATCAACGTTATCGTCTTCGAGATGTTCACGGCAGGGACAGACACAACCACCAGTACATTAGAGTGGGCTATGGCGGAGCTTCTCCACAACCCAGAGTCGCTGCAGAAACTTCAGGCTGAGCTACGAGCCACCATTGCGCCTAACGAAAATCTCAAAGAAACCCATCTCCAAAACCTCCCATATCTGGACGCCGTCGTCAAAGAAACCCTTCGCCTCCACCCGCCGCTGCCGTTCCTCTTCCCGAGAATGGCCATGAAGCCTTGCAACATCCTCGGCTATCGTATTCCGGCTGAAACCCAAGTCTTAGTCAACTTTTGGGCCATCGGACGTGACCCCCAAAACTGGAAAGATGCTTTAGTTTTCTCGCCGGAGAGATTCTTTGATCCCTCCTCCGGCCACAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCTTTTGGCTCCGGGCGCCGTATGTGCCCGGCGGTGCCACTGGCATCGAGAGTTCTTCCTATGGCTTTGGGGTCGTTGATTTTGTTGTTTGATTGGGCTTTGCCGGACGGAGTTTCGCCGAAGGAGATGGACATGTCGGAGCAAATGGGAATTACCCTACGAAAGAAGGTTCCTTTGAAGGCTATTCCAACTCCTCACAAACGACGTCGTTTTGATTAA 1575 48.63 MELQIIAGFILLLFLWGLWLWRCRGAGADRQLPPGPPCWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVVSSSTVAREMFKTHDAPLSGRMIYEAMKGDHGTQGSLITSQYGPHWRMLRRLATSEFFVARQLESMKHVRRHCIDAMIRHVEEGCHPCGNSPGLDVGKFMFVMGFNLIGNLIFSKDLLEANSKRGKEFYYHTRKVMEMAGKPNVADFLPALRWLDPQGIRRKTQFHVNKAFEIAGEFIKERLLIREKRDIINDDDDDEKKEENRKKDYLDVLLEFRGDGVEEPSRFSSWIINVIVFEMFTAGTDTTTSTLEWAMAELLHNPESLQKLQAELRATIAPNENLKETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCNILGYRIPAETQVLVNFWAIGRDPQNWKDALVFSPERFFDPSSGHKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLILLFDWALPDGVSPKEMDMSEQMGITLRKKVPLKAIPTPHKRRRFD* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25639415 25642244 - Chy4G086950.1 Chy04g01977 225876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g01977 524 PANTHER CYTOCHROME P450 76A1-LIKE 7 518 - -
Chy04g01977 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Chy04g01977 524 PANTHER CYTOCHROME P450 FAMILY 1 7 518 - -
Chy04g01977 524 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 Pfam Cytochrome P450 33 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g01977 524 SUPERFAMILY Cytochrome P450 33 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01977 Chy-Chr4:25639415 Chy09g01156 Chy-Chr9:13792588 1.02E-108 dispersed
Chy04g01977 Chy-Chr4:25639415 Chy12g01221 Chy-Chr12:16937742 2.02E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g01977 - - csv:101222700 976.081